Equivalence class NR_all_51994.1 Obsolete
| # | IFE | Standardized name | Molecule | Organism | Source | Rfam | Title | Method | Res. Å | Date |
|---|---|---|---|---|---|---|---|---|---|---|
| 1 | 4RCJ|1|B (rep) | RNA (5'-R(*GP*GP*(6MZ)P*CP*U)-3') | synthetic construct | Synthetic | Crystal structure of YTHDF1 YTH domain in complex with 5mer m6A RNA | X-ray diffraction | 1.6 | 2014-11-12 | ||
| 2 | 4R3I|0|B | RNA (5'-R(*GP*GP*(6MZ)P*CP*U)-3') | synthetic construct | Synthetic | The crystal structure of an RNA complex | X-ray diffraction | 1.8 | 2014-09-17 |
Release history
| Release | 4.0 |
|---|---|
| Date | 2016-07-25 |
Parents
| This class | Parent classes | Release id | Intersection | Added to this class | Only in parent |
|---|---|---|---|---|---|
| NR_all_51994.1 | NR_all_07397.1 | 4.0 | (1) 4R3I|0|B | (1) 4RCJ|1|B | (0) |
| NR_all_51994.1 | NR_all_96040.1 | 4.0 | (1) 4RCJ|1|B | (1) 4R3I|0|B | (0) |
Children
| This class | Descendant classes | Release id | Intersection | Only in this class | Added to child |
|---|---|---|---|---|---|
| NR_all_51994.1 | NR_2.0_46283.1 | 5.0 | (1) 4RCJ|1|B | (1) 4R3I|0|B | (0) |
| NR_all_51994.1 | NR_2.0_70785.1 | 5.0 | (1) 4R3I|0|B | (1) 4RCJ|1|B | (0) |
| NR_all_51994.1 | NR_2.5_46283.1 | 5.0 | (1) 4RCJ|1|B | (1) 4R3I|0|B | (0) |
| NR_all_51994.1 | NR_2.5_70785.1 | 5.0 | (1) 4R3I|0|B | (1) 4RCJ|1|B | (0) |
| NR_all_51994.1 | NR_20.0_46283.1 | 5.0 | (1) 4RCJ|1|B | (1) 4R3I|0|B | (0) |
| NR_all_51994.1 | NR_20.0_70785.1 | 5.0 | (1) 4R3I|0|B | (1) 4RCJ|1|B | (0) |
| NR_all_51994.1 | NR_3.0_46283.1 | 5.0 | (1) 4RCJ|1|B | (1) 4R3I|0|B | (0) |
| NR_all_51994.1 | NR_3.0_70785.1 | 5.0 | (1) 4R3I|0|B | (1) 4RCJ|1|B | (0) |
| NR_all_51994.1 | NR_3.5_46283.1 | 5.0 | (1) 4RCJ|1|B | (1) 4R3I|0|B | (0) |
| NR_all_51994.1 | NR_3.5_70785.1 | 5.0 | (1) 4R3I|0|B | (1) 4RCJ|1|B | (0) |
| NR_all_51994.1 | NR_4.0_46283.1 | 5.0 | (1) 4RCJ|1|B | (1) 4R3I|0|B | (0) |
| NR_all_51994.1 | NR_4.0_70785.1 | 5.0 | (1) 4R3I|0|B | (1) 4RCJ|1|B | (0) |
| NR_all_51994.1 | NR_all_46283.1 | 5.0 | (1) 4RCJ|1|B | (1) 4R3I|0|B | (0) |
| NR_all_51994.1 | NR_all_70785.1 | 5.0 | (1) 4R3I|0|B | (1) 4RCJ|1|B | (0) |
Heat map of mutual geometric discrepancy, in Angstroms per nucleotide. Instances are ordered to put similar structures near each other. The colorbar ranges from 0 to the maximum observed discrepancy, up to 0.5
#S - ordering by similarity (same as in the heat map).| #S | PDB | Title | Method | Resolution | Length | NAKB_NA_annotation | NAKB_protein_annotation |
|---|---|---|---|---|---|---|---|
| 1 | 4RCJ|1|B | Title: Crystal structure of YTHDF1 YTH domain in complex with 5mer m6A RNA | X-RAY DIFFRACTION | 1.6 | 4 | ||
| 2 | 4R3I|0|B | Title: The crystal structure of an RNA complex | X-RAY DIFFRACTION | 1.8 | 4 |
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