Equivalence class NR_all_51482.1 Obsolete
| # | IFE | Standardized name | Molecule | Organism | Source | Rfam | Title | Method | Res. Å | Date |
|---|---|---|---|---|---|---|---|---|---|---|
| 1 | 398D|1|C (rep) | RNA (5'-R(*GP*CP*AP*GP*UP*GP*GP*C)-3') | 3'-DNA-RNA-5' JUNCTION FORMED DURING INITIATION OF MINUS-STRAND SYNTHESIS OF HIV REPLICATION | X-ray diffraction | 1.94 | 1998-10-06 | ||||
| 2 | 398D|1|A | RNA (5'-R(*GP*CP*AP*GP*UP*GP*GP*C)-3') | 3'-DNA-RNA-5' JUNCTION FORMED DURING INITIATION OF MINUS-STRAND SYNTHESIS OF HIV REPLICATION | X-ray diffraction | 1.94 | 1998-10-06 |
Release history
| Release | 2.0 |
|---|---|
| Date | 2014-12-05 |
Parents
| This class | Parent classes | Release id | Intersection | Added to this class | Only in parent |
|---|
Children
| This class | Descendant classes | Release id | Intersection | Only in this class | Added to child |
|---|---|---|---|---|---|
| NR_all_51482.1 | NR_2.0_51482.2 | 3.0 | (2) 398D|1|C, 398D|1|A | (0) | (0) |
| NR_all_51482.1 | NR_2.5_51482.2 | 3.0 | (2) 398D|1|C, 398D|1|A | (0) | (0) |
| NR_all_51482.1 | NR_20.0_51482.2 | 3.0 | (2) 398D|1|C, 398D|1|A | (0) | (0) |
| NR_all_51482.1 | NR_3.0_51482.2 | 3.0 | (2) 398D|1|C, 398D|1|A | (0) | (0) |
| NR_all_51482.1 | NR_3.5_51482.2 | 3.0 | (2) 398D|1|C, 398D|1|A | (0) | (0) |
| NR_all_51482.1 | NR_4.0_51482.2 | 3.0 | (2) 398D|1|C, 398D|1|A | (0) | (0) |
| NR_all_51482.1 | NR_all_51482.2 | 3.0 | (2) 398D|1|C, 398D|1|A | (0) | (1) 1BYX|1|A |
Heat map of mutual geometric discrepancy, in Angstroms per nucleotide. Instances are ordered to put similar structures near each other. The colorbar ranges from 0 to the maximum observed discrepancy, up to 0.5
#S - ordering by similarity (same as in the heat map).| #S | PDB | Title | Method | Resolution | Length | NAKB_NA_annotation | NAKB_protein_annotation |
|---|---|---|---|---|---|---|---|
| 1 | 398D|1|C | Title: 3'-DNA-RNA-5' JUNCTION FORMED DURING INITIATION OF MINUS-STRAND SYNTHESIS OF HIV REPLICATION | X-RAY DIFFRACTION | 1.94 | 8 | ||
| 2 | 398D|1|A | Title: 3'-DNA-RNA-5' JUNCTION FORMED DURING INITIATION OF MINUS-STRAND SYNTHESIS OF HIV REPLICATION | X-RAY DIFFRACTION | 1.94 | 8 |
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