Equivalence class NR_all_44091.1 Obsolete
| # | IFE | Standardized name | Molecule | Organism | Source | Rfam | Title | Method | Res. Å | Date |
|---|---|---|---|---|---|---|---|---|---|---|
| 1 | 3GLP|1|C+ 3GLP|1|D (rep) | 5'-R(*GP*CP*UP*GP*CP*UP*GP*C)-3' | 1.23 A resolution X-ray structure of (GCUGCUGC)2 | X-ray diffraction | 1.23 | 2009-05-26 | ||||
| 2 | 3GLP|1|B+ 3GLP|1|A | 5'-R(*GP*CP*UP*GP*CP*UP*GP*C)-3' | 1.23 A resolution X-ray structure of (GCUGCUGC)2 | X-ray diffraction | 1.23 | 2009-05-26 | ||||
| 3 | 3GLP|1|E | 5'-R(*GP*CP*UP*GP*CP*UP*GP*C)-3' | 1.23 A resolution X-ray structure of (GCUGCUGC)2 | X-ray diffraction | 1.23 | 2009-05-26 |
Release history
| Release | 3.0 |
|---|---|
| Date | 2016-07-25 |
Parents
| This class | Parent classes | Release id | Intersection | Added to this class | Only in parent |
|---|---|---|---|---|---|
| NR_all_44091.1 | NR_all_61028.1 | 3.0 | (1) 3GLP|1|E | (2) 3GLP|1|B+3GLP|1|A, 3GLP|1|C+3GLP|1|D | (3) 3GLP|1|A, 3GLP|1|B, 3GLP|1|C |
Children
| This class | Descendant classes | Release id | Intersection | Only in this class | Added to child |
|---|---|---|---|---|---|
| NR_all_44091.1 | NR_1.5_44091.2 | 4.0 | (3) 3GLP|1|E, 3GLP|1|C+3GLP|1|D, 3GLP|1|B+3GLP|1|A | (0) | (1) 5EMF|1|A |
| NR_all_44091.1 | NR_2.0_44091.2 | 4.0 | (3) 3GLP|1|E, 3GLP|1|C+3GLP|1|D, 3GLP|1|B+3GLP|1|A | (0) | (1) 5EMF|1|A |
| NR_all_44091.1 | NR_2.5_44091.2 | 4.0 | (3) 3GLP|1|E, 3GLP|1|C+3GLP|1|D, 3GLP|1|B+3GLP|1|A | (0) | (1) 5EMF|1|A |
| NR_all_44091.1 | NR_20.0_44091.2 | 4.0 | (3) 3GLP|1|C+3GLP|1|D, 3GLP|1|B+3GLP|1|A, 3GLP|1|E | (0) | (1) 5EMF|1|A |
| NR_all_44091.1 | NR_3.0_44091.2 | 4.0 | (3) 3GLP|1|E, 3GLP|1|C+3GLP|1|D, 3GLP|1|B+3GLP|1|A | (0) | (1) 5EMF|1|A |
| NR_all_44091.1 | NR_3.5_44091.2 | 4.0 | (3) 3GLP|1|E, 3GLP|1|C+3GLP|1|D, 3GLP|1|B+3GLP|1|A | (0) | (1) 5EMF|1|A |
| NR_all_44091.1 | NR_4.0_44091.2 | 4.0 | (3) 3GLP|1|E, 3GLP|1|C+3GLP|1|D, 3GLP|1|B+3GLP|1|A | (0) | (1) 5EMF|1|A |
| NR_all_44091.1 | NR_all_44091.2 | 4.0 | (3) 3GLP|1|E, 3GLP|1|C+3GLP|1|D, 3GLP|1|B+3GLP|1|A | (0) | (1) 5EMF|1|A |
Heat map of mutual geometric discrepancy, in Angstroms per nucleotide. Instances are ordered to put similar structures near each other. The colorbar ranges from 0 to the maximum observed discrepancy, up to 0.5
#S - ordering by similarity (same as in the heat map).| #S | PDB | Title | Method | Resolution | Length | NAKB_NA_annotation | NAKB_protein_annotation |
|---|---|---|---|---|---|---|---|
| 1 | 3GLP|1|C+3GLP|1|D | Title: 1.23 A resolution X-ray structure of (GCUGCUGC)2 | X-RAY DIFFRACTION | 1.23 | 13 | ||
| 2 | 3GLP|1|E | Title: 1.23 A resolution X-ray structure of (GCUGCUGC)2 | X-RAY DIFFRACTION | 1.23 | 8 | ||
| 3 | 3GLP|1|B+3GLP|1|A | Title: 1.23 A resolution X-ray structure of (GCUGCUGC)2 | X-RAY DIFFRACTION | 1.23 | 17 |
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