Equivalence class NR_all_42436.1 Obsolete
| # | IFE | Standardized name | Molecule | Organism | Source | Rfam | Title | Method | Res. Å | Date |
|---|---|---|---|---|---|---|---|---|---|---|
| 1 | 3MIJ|1|A (rep) | RNA (5'-R(*UP*AP*GP*GP*GP*UP*UP*AP*GP*GP*GP*U)-3') | Homo sapiens | Eukarya | Crystal structure of a telomeric RNA G-quadruplex complexed with an acridine-based ligand. | X-ray diffraction | 2.6 | 2011-02-16 |
Release history
| Release | 2.0 |
|---|---|
| Date | 2014-12-05 |
Parents
| This class | Parent classes | Release id | Intersection | Added to this class | Only in parent |
|---|
Children
| This class | Descendant classes | Release id | Intersection | Only in this class | Added to child |
|---|---|---|---|---|---|
| NR_all_42436.1 | NR_20.0_40810.1 | 3.0 | (1) 3MIJ|1|A | (0) | (2) 3IBK|1|B, 3IBK|1|A |
| NR_all_42436.1 | NR_3.0_40810.1 | 3.0 | (1) 3MIJ|1|A | (0) | (2) 3IBK|1|B, 3IBK|1|A |
| NR_all_42436.1 | NR_3.5_40810.1 | 3.0 | (1) 3MIJ|1|A | (0) | (2) 3IBK|1|B, 3IBK|1|A |
| NR_all_42436.1 | NR_4.0_40810.1 | 3.0 | (1) 3MIJ|1|A | (0) | (2) 3IBK|1|B, 3IBK|1|A |
| NR_all_42436.1 | NR_all_40810.1 | 3.0 | (1) 3MIJ|1|A | (0) | (4) 3IBK|1|B, 3IBK|1|A, 2KBP|1|B, 2KBP|1|A |
Heat map of mutual geometric discrepancy, in Angstroms per nucleotide. Instances are ordered to put similar structures near each other. The colorbar ranges from 0 to the maximum observed discrepancy, up to 0.5
#S - ordering by similarity (same as in the heat map).| #S | PDB | Title | Method | Resolution | Length | NAKB_NA_annotation | NAKB_protein_annotation |
|---|---|---|---|---|---|---|---|
| 1 | 3MIJ|1|A | Title: Crystal structure of a telomeric RNA G-quadruplex complexed with an acridine-based ligand. | X-RAY DIFFRACTION | 2.6 | 12 |
Coloring options: