Equivalence class NR_all_33418.1 Obsolete
| # | IFE | Standardized name | Molecule | Organism | Source | Rfam | Title | Method | Res. Å | Date |
|---|---|---|---|---|---|---|---|---|---|---|
| 1 | 3JBU|1|v (rep) | Transfer RNA | glycine-tRNA | Escherichia coli | Bacteria | RF00005 | Mechanisms of Ribosome Stalling by SecM at Multiple Elongation Steps | Electron microscopy | 3.64 | 2016-01-27 |
| 2 | 3JBV|1|W | Transfer RNA | RNA (75-MER), RNA (5'-R(P*CP*UP*GP*GP*CP*CP*CP*UP*CP*AP*A)-3') | Escherichia coli | Bacteria | RF00005 | Mechanisms of Ribosome Stalling by SecM at Multiple Elongation Steps | Electron microscopy | 3.32 | 2016-01-27 |
Release history
| Release | 4.0 |
|---|---|
| Date | 2016-07-25 |
Parents
| This class | Parent classes | Release id | Intersection | Added to this class | Only in parent |
|---|---|---|---|---|---|
| NR_all_33418.1 | NR_all_02346.1 | 4.0 | (1) 3JBV|1|W | (1) 3JBU|1|v | (0) |
| NR_all_33418.1 | NR_all_78854.1 | 4.0 | (1) 3JBU|1|v | (1) 3JBV|1|W | (0) |
Children
| This class | Descendant classes | Release id | Intersection | Only in this class | Added to child |
|---|---|---|---|---|---|
| NR_all_33418.1 | NR_20.0_41077.1 | 5.0 | (1) 3JBV|1|W | (1) 3JBU|1|v | (0) |
| NR_all_33418.1 | NR_20.0_62490.1 | 5.0 | (1) 3JBU|1|v | (1) 3JBV|1|W | (0) |
| NR_all_33418.1 | NR_3.5_41077.1 | 5.0 | (1) 3JBV|1|W | (1) 3JBU|1|v | (0) |
| NR_all_33418.1 | NR_4.0_41077.1 | 5.0 | (1) 3JBV|1|W | (1) 3JBU|1|v | (0) |
| NR_all_33418.1 | NR_4.0_62490.1 | 5.0 | (1) 3JBU|1|v | (1) 3JBV|1|W | (0) |
| NR_all_33418.1 | NR_all_41077.1 | 5.0 | (1) 3JBV|1|W | (1) 3JBU|1|v | (0) |
| NR_all_33418.1 | NR_all_62490.1 | 5.0 | (1) 3JBU|1|v | (1) 3JBV|1|W | (0) |
Heat map of mutual geometric discrepancy, in Angstroms per nucleotide. Instances are ordered to put similar structures near each other. The colorbar ranges from 0 to the maximum observed discrepancy, up to 0.5
#S - ordering by similarity (same as in the heat map).| #S | PDB | Title | Method | Resolution | Length | NAKB_NA_annotation | NAKB_protein_annotation |
|---|---|---|---|---|---|---|---|
| 1 | 3JBU|1|v | Title: Mechanisms of Ribosome Stalling by SecM at Multiple Elongation Steps | ELECTRON MICROSCOPY | 3.64 | 76 | ||
| 2 | 3JBV|1|W | Title: Mechanisms of Ribosome Stalling by SecM at Multiple Elongation Steps | ELECTRON MICROSCOPY | 3.32 | 75 |
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