Equivalence class NR_all_30814.1 Obsolete
| # | IFE | Standardized name | Molecule | Organism | Source | Rfam | Title | Method | Res. Å | Date |
|---|---|---|---|---|---|---|---|---|---|---|
| 1 | 1F1T|1|A (rep) | MALACHITE GREEN APTAMER RNA | CRYSTAL STRUCTURE OF THE MALACHITE GREEN APTAMER COMPLEXED WITH TETRAMETHYL-ROSAMINE | X-ray diffraction | 2.8 | 2000-09-04 | ||||
| 2 | 1Q8N|1|A | RNA Aptamer | Solution Structure of the Malachite Green RNA Binding Aptamer | Solution NMR | 2004-03-23 |
Parents
| This class | Parent classes | Release id | Intersection | Added to this class | Only in parent |
|---|
Children
| This class | Descendant classes | Release id | Intersection | Only in this class | Added to child |
|---|---|---|---|---|---|
| NR_all_30814.1 | NR_20.0_71150.1 | 5.0 | (1) 1F1T|1|A | (1) 1Q8N|1|A | (0) |
| NR_all_30814.1 | NR_3.0_71150.1 | 5.0 | (1) 1F1T|1|A | (1) 1Q8N|1|A | (0) |
| NR_all_30814.1 | NR_3.5_71150.1 | 5.0 | (1) 1F1T|1|A | (1) 1Q8N|1|A | (0) |
| NR_all_30814.1 | NR_4.0_71150.1 | 5.0 | (1) 1F1T|1|A | (1) 1Q8N|1|A | (0) |
| NR_all_30814.1 | NR_all_59558.1 | 5.0 | (1) 1Q8N|1|A | (1) 1F1T|1|A | (0) |
| NR_all_30814.1 | NR_all_71150.1 | 5.0 | (1) 1F1T|1|A | (1) 1Q8N|1|A | (0) |
Heat map of mutual geometric discrepancy, in Angstroms per nucleotide. Instances are ordered to put similar structures near each other. The colorbar ranges from 0 to the maximum observed discrepancy, up to 0.5
#S - ordering by similarity (same as in the heat map).| #S | PDB | Title | Method | Resolution | Length | NAKB_NA_annotation | NAKB_protein_annotation |
|---|---|---|---|---|---|---|---|
| 1 | 1F1T|1|A | Title: CRYSTAL STRUCTURE OF THE MALACHITE GREEN APTAMER COMPLEXED WITH TETRAMETHYL-ROSAMINE | X-RAY DIFFRACTION | 2.8 | 33 | ||
| 2 | 1Q8N|1|A | Title: Solution Structure of the Malachite Green RNA Binding Aptamer | SOLUTION NMR | 38 |
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