Equivalence class NR_all_26530.1 Obsolete
| # | IFE | Standardized name | Molecule | Organism | Source | Rfam | Title | Method | Res. Å | Date |
|---|---|---|---|---|---|---|---|---|---|---|
| 1 | 4K4U|1|F (rep) | RNA (5'-R(*AP*AP*GP*UP*CP*UP*CP*CP*AP*GP*GP*UP*CP*UP*CP*UP*CP*UP*CP*GP*UP*CP*GP*AP*AP*A)-3'), RNA (5'-R(*UP*GP*UP*UP*CP*GP*AP*CP*GP*AP*GP*AP*GP*AP*GP*A)-3'), RNA (5'-R(P*GP*GP*GP*GP*GP*AP*GP*AP*UP*GP*A)-3') | Poliovirus polymerase elongation complex (r5_form) | X-ray diffraction | 2.85 | 2013-05-22 | ||||
| 2 | 4K4U|1|B | RNA (5'-R(*AP*AP*GP*UP*CP*UP*CP*CP*AP*GP*GP*UP*CP*UP*CP*UP*CP*UP*CP*GP*UP*CP*GP*AP*AP*A)-3'), RNA (5'-R(*UP*GP*UP*UP*CP*GP*AP*CP*GP*AP*GP*AP*GP*AP*GP*A)-3'), RNA (5'-R(P*GP*GP*GP*GP*GP*AP*GP*AP*UP*GP*A)-3') | Poliovirus polymerase elongation complex (r5_form) | X-ray diffraction | 2.85 | 2013-05-22 | ||||
| 3 | 4K4V|1|B | RNA (5'-R(*AP*AP*GP*UP*CP*UP*CP*CP*AP*GP*GP*UP*CP*UP*CP*UP*CP*UP*CP*GP*UP*CP*GP*AP*AP*A)-3') | Poliovirus polymerase elongation complex (r5+1_form) | X-ray diffraction | 2.63 | 2013-05-22 | ||||
| 4 | 4K4V|1|F | RNA (5'-R(*AP*AP*GP*UP*CP*UP*CP*CP*AP*GP*GP*UP*CP*UP*CP*UP*CP*UP*CP*GP*UP*CP*GP*AP*AP*A)-3') | Poliovirus polymerase elongation complex (r5+1_form) | X-ray diffraction | 2.63 | 2013-05-22 |
Release history
| Release | 2.0 |
|---|---|
| Date | 2014-12-05 |
Parents
| This class | Parent classes | Release id | Intersection | Added to this class | Only in parent |
|---|
Children
| This class | Descendant classes | Release id | Intersection | Only in this class | Added to child |
|---|---|---|---|---|---|
| NR_all_26530.1 | NR_20.0_27590.1 | 3.0 | (2) 4K4V|1|B, 4K4V|1|F | (2) 4K4U|1|F, 4K4U|1|B | (0) |
| NR_all_26530.1 | NR_3.0_27590.1 | 3.0 | (2) 4K4V|1|F, 4K4V|1|B | (2) 4K4U|1|B, 4K4U|1|F | (0) |
| NR_all_26530.1 | NR_3.5_27590.1 | 3.0 | (2) 4K4V|1|B, 4K4V|1|F | (2) 4K4U|1|B, 4K4U|1|F | (0) |
| NR_all_26530.1 | NR_4.0_27590.1 | 3.0 | (2) 4K4V|1|B, 4K4V|1|F | (2) 4K4U|1|F, 4K4U|1|B | (0) |
| NR_all_26530.1 | NR_all_27590.1 | 3.0 | (2) 4K4V|1|B, 4K4V|1|F | (2) 4K4U|1|F, 4K4U|1|B | (0) |
Heat map of mutual geometric discrepancy, in Angstroms per nucleotide. Instances are ordered to put similar structures near each other. The colorbar ranges from 0 to the maximum observed discrepancy, up to 0.5
#S - ordering by similarity (same as in the heat map).| #S | PDB | Title | Method | Resolution | Length | NAKB_NA_annotation | NAKB_protein_annotation |
|---|---|---|---|---|---|---|---|
| 1 | 4K4U|1|F | Title: Poliovirus polymerase elongation complex (r5_form) | X-RAY DIFFRACTION | 2.85 | 19 | ||
| 2 | 4K4V|1|B | Title: Poliovirus polymerase elongation complex (r5+1_form) | X-RAY DIFFRACTION | 2.63 | 13 | ||
| 3 | 4K4V|1|F | Title: Poliovirus polymerase elongation complex (r5+1_form) | X-RAY DIFFRACTION | 2.63 | 13 | ||
| 4 | 4K4U|1|B | Title: Poliovirus polymerase elongation complex (r5_form) | X-RAY DIFFRACTION | 2.85 | 19 |
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