NR_all_18918.1

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History
Heat map

#	IFE	Standardized name	Molecule	Organism	Source	Rfam	Title	Method	Res. Å	Date
1	1GTF\|1\|W (rep)		(GAGUU)10GAG 53-NUCLEOTIDE RNA				The structure of the trp RNA-binding attenuation protein (TRAP) bound to a 53-nucleotide RNA molecule containing GAGUU repeats	X-ray diffraction	1.75	2002-04-05

Release history

Release	2.0
Date	2014-12-05

Parents

This class	Parent classes	Release id	Intersection	Added to this class	Only in parent

Children

This class	Descendant classes	Release id	Intersection	Only in this class	Added to child
NR_all_18918.1	NR_2.0_69927.1	3.0	(1) 1GTF\|1\|W	(0)	(10) 5EEX\|1\|W, 5EEW\|1\|W, 5EEV\|1\|W, 5EEU\|1\|W, 5EF3\|1\|W, 5EF2\|1\|W, 5EF1\|1\|W, 5EF0\|1\|W, 5EEZ\|1\|W, 5EEY\|1\|W
NR_all_18918.1	NR_2.5_69927.1	3.0	(1) 1GTF\|1\|W	(0)	(10) 5EF3\|1\|W, 5EF2\|1\|W, 5EF1\|1\|W, 5EF0\|1\|W, 5EEZ\|1\|W, 5EEY\|1\|W, 5EEX\|1\|W, 5EEW\|1\|W, 5EEV\|1\|W, 5EEU\|1\|W
NR_all_18918.1	NR_20.0_69927.1	3.0	(1) 1GTF\|1\|W	(0)	(10) 5EF3\|1\|W, 5EF2\|1\|W, 5EF1\|1\|W, 5EF0\|1\|W, 5EEZ\|1\|W, 5EEY\|1\|W, 5EEX\|1\|W, 5EEW\|1\|W, 5EEV\|1\|W, 5EEU\|1\|W
NR_all_18918.1	NR_3.0_69927.1	3.0	(1) 1GTF\|1\|W	(0)	(10) 5EEZ\|1\|W, 5EEY\|1\|W, 5EEX\|1\|W, 5EEW\|1\|W, 5EEV\|1\|W, 5EEU\|1\|W, 5EF3\|1\|W, 5EF2\|1\|W, 5EF1\|1\|W, 5EF0\|1\|W
NR_all_18918.1	NR_3.5_69927.1	3.0	(1) 1GTF\|1\|W	(0)	(10) 5EF3\|1\|W, 5EF2\|1\|W, 5EF1\|1\|W, 5EF0\|1\|W, 5EEZ\|1\|W, 5EEY\|1\|W, 5EEX\|1\|W, 5EEW\|1\|W, 5EEV\|1\|W, 5EEU\|1\|W
NR_all_18918.1	NR_4.0_69927.1	3.0	(1) 1GTF\|1\|W	(0)	(10) 5EEV\|1\|W, 5EEU\|1\|W, 5EF3\|1\|W, 5EF2\|1\|W, 5EF1\|1\|W, 5EF0\|1\|W, 5EEZ\|1\|W, 5EEY\|1\|W, 5EEX\|1\|W, 5EEW\|1\|W
NR_all_18918.1	NR_all_69927.1	3.0	(1) 1GTF\|1\|W	(0)	(10) 5EF1\|1\|W, 5EF0\|1\|W, 5EEZ\|1\|W, 5EEY\|1\|W, 5EEX\|1\|W, 5EEW\|1\|W, 5EEV\|1\|W, 5EEU\|1\|W, 5EF3\|1\|W, 5EF2\|1\|W

Heat map of mutual geometric discrepancy, in Angstroms per nucleotide. Instances are ordered to put similar structures near each other. The colorbar ranges from 0 to the maximum observed discrepancy, up to 0.5

#S - ordering by similarity (same as in the heat map).

#S	PDB	Title	Method	Resolution	Length	NAKB_NA_annotation	NAKB_protein_annotation
1	1GTF\|1\|W	Title: The structure of the trp RNA-binding attenuation protein (TRAP) bound to a 53-nucleotide RNA molecule containing GAGUU repeats	X-RAY DIFFRACTION	1.75	44

Coloring options: Nucleotide numbers

Equivalence class NR_all_18918.1 Obsolete

Release history

Parents

Children