Equivalence class NR_all_14759.1 Obsolete
| # | IFE | Standardized name | Molecule | Organism | Source | Rfam | Title | Method | Res. Å | Date |
|---|---|---|---|---|---|---|---|---|---|---|
| 1 | 5F5H|1|D (rep) | RNA (5'-R(P*CP*CP*AP*CP*AP*CP*CP*GP*UP*UP*CP*UP*AP*GP*GP*UP*GP*CP*UP*GP*G)-3') | Mus musculus | Eukarya | X-ray structure of Roquin ROQ domain in complex with Ox40 hexa-loop RNA motif | X-ray diffraction | 2.23 | 2016-04-06 | ||
| 2 | 5F5H|1|C | RNA (5'-R(P*CP*CP*AP*CP*AP*CP*CP*GP*UP*UP*CP*UP*AP*GP*GP*UP*GP*CP*UP*GP*G)-3') | Mus musculus | Eukarya | X-ray structure of Roquin ROQ domain in complex with Ox40 hexa-loop RNA motif | X-ray diffraction | 2.23 | 2016-04-06 |
Release history
| Release | 4.0 |
|---|---|
| Date | 2016-07-25 |
Parents
| This class | Parent classes | Release id | Intersection | Added to this class | Only in parent |
|---|---|---|---|---|---|
| NR_all_14759.1 | NR_all_24518.1 | 4.0 | (1) 5F5H|1|D | (1) 5F5H|1|C | (0) |
| NR_all_14759.1 | NR_all_69823.1 | 4.0 | (1) 5F5H|1|C | (1) 5F5H|1|D | (0) |
Children
| This class | Descendant classes | Release id | Intersection | Only in this class | Added to child |
|---|---|---|---|---|---|
| NR_all_14759.1 | NR_2.5_33789.1 | 5.0 | (1) 5F5H|1|D | (1) 5F5H|1|C | (0) |
| NR_all_14759.1 | NR_2.5_81726.1 | 5.0 | (1) 5F5H|1|C | (1) 5F5H|1|D | (0) |
| NR_all_14759.1 | NR_20.0_33789.1 | 5.0 | (1) 5F5H|1|D | (1) 5F5H|1|C | (0) |
| NR_all_14759.1 | NR_20.0_81726.1 | 5.0 | (1) 5F5H|1|C | (1) 5F5H|1|D | (0) |
| NR_all_14759.1 | NR_3.0_33789.1 | 5.0 | (1) 5F5H|1|D | (1) 5F5H|1|C | (0) |
| NR_all_14759.1 | NR_3.0_81726.1 | 5.0 | (1) 5F5H|1|C | (1) 5F5H|1|D | (0) |
| NR_all_14759.1 | NR_3.5_33789.1 | 5.0 | (1) 5F5H|1|D | (1) 5F5H|1|C | (0) |
| NR_all_14759.1 | NR_3.5_81726.1 | 5.0 | (1) 5F5H|1|C | (1) 5F5H|1|D | (0) |
| NR_all_14759.1 | NR_4.0_33789.1 | 5.0 | (1) 5F5H|1|D | (1) 5F5H|1|C | (0) |
| NR_all_14759.1 | NR_4.0_81726.1 | 5.0 | (1) 5F5H|1|C | (1) 5F5H|1|D | (0) |
| NR_all_14759.1 | NR_all_33789.1 | 5.0 | (1) 5F5H|1|D | (1) 5F5H|1|C | (0) |
| NR_all_14759.1 | NR_all_81726.1 | 5.0 | (1) 5F5H|1|C | (1) 5F5H|1|D | (0) |
Heat map of mutual geometric discrepancy, in Angstroms per nucleotide. Instances are ordered to put similar structures near each other. The colorbar ranges from 0 to the maximum observed discrepancy, up to 0.5
#S - ordering by similarity (same as in the heat map).| #S | PDB | Title | Method | Resolution | Length | NAKB_NA_annotation | NAKB_protein_annotation |
|---|---|---|---|---|---|---|---|
| 1 | 5F5H|1|D | Title: X-ray structure of Roquin ROQ domain in complex with Ox40 hexa-loop RNA motif | X-RAY DIFFRACTION | 2.23 | 21 | ||
| 2 | 5F5H|1|C | Title: X-ray structure of Roquin ROQ domain in complex with Ox40 hexa-loop RNA motif | X-RAY DIFFRACTION | 2.23 | 21 |
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