Equivalence class NR_all_12490.1 Obsolete
| # | IFE | Standardized name | Molecule | Organism | Source | Rfam | Title | Method | Res. Å | Date |
|---|---|---|---|---|---|---|---|---|---|---|
| 1 | 4AM3|1|D (rep) | RNA, 5'-R(*UP*AP*AP*CP*UP*UP*UP*GP*GP)-3' | Escherichia coli | Bacteria | Crystal structure of C. crescentus PNPase bound to RNA | X-ray diffraction | 3 | 2012-04-18 |
Release history
| Release | 2.0 |
|---|---|
| Date | 2014-12-05 |
Parents
| This class | Parent classes | Release id | Intersection | Added to this class | Only in parent |
|---|
Children
| This class | Descendant classes | Release id | Intersection | Only in this class | Added to child |
|---|---|---|---|---|---|
| NR_all_12490.1 | NR_20.0_82001.1 | 3.0 | (1) 4AM3|1|D | (0) | (3) 4AM3|1|I, 4AM3|1|H, 4AM3|1|E |
| NR_all_12490.1 | NR_3.0_82001.1 | 3.0 | (1) 4AM3|1|D | (0) | (3) 4AM3|1|I, 4AM3|1|H, 4AM3|1|E |
| NR_all_12490.1 | NR_3.5_82001.1 | 3.0 | (1) 4AM3|1|D | (0) | (3) 4AM3|1|I, 4AM3|1|H, 4AM3|1|E |
| NR_all_12490.1 | NR_4.0_82001.1 | 3.0 | (1) 4AM3|1|D | (0) | (3) 4AM3|1|I, 4AM3|1|H, 4AM3|1|E |
| NR_all_12490.1 | NR_all_82001.1 | 3.0 | (1) 4AM3|1|D | (0) | (3) 4AM3|1|I, 4AM3|1|H, 4AM3|1|E |
Heat map of mutual geometric discrepancy, in Angstroms per nucleotide. Instances are ordered to put similar structures near each other. The colorbar ranges from 0 to the maximum observed discrepancy, up to 0.5
#S - ordering by similarity (same as in the heat map).| #S | PDB | Title | Method | Resolution | Length | NAKB_NA_annotation | NAKB_protein_annotation |
|---|---|---|---|---|---|---|---|
| 1 | 4AM3|1|D | Title: Crystal structure of C. crescentus PNPase bound to RNA | X-RAY DIFFRACTION | 3 | 1 |
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