Equivalence class NR_all_01232.1 Obsolete
| # | IFE | Standardized name | Molecule | Organism | Source | Rfam | Title | Method | Res. Å | Date |
|---|---|---|---|---|---|---|---|---|---|---|
| 1 | 5F5F|1|F (rep) | RNA (5'-R(P*UP*GP*AP*CP*UP*GP*CP*GP*UP*UP*UP*UP*AP*GP*GP*AP*GP*UP*UP*A)-3') | Mus musculus | Eukarya | X-ray structure of Roquin ROQ domain in complex with a Selex-derived hexa-loop RNA motif | X-ray diffraction | 3 | 2016-04-06 |
Release history
| Release | 3.0 |
|---|---|
| Date | 2016-07-25 |
Parents
| This class | Parent classes | Release id | Intersection | Added to this class | Only in parent |
|---|
Children
| This class | Descendant classes | Release id | Intersection | Only in this class | Added to child |
|---|---|---|---|---|---|
| NR_all_01232.1 | NR_20.0_40467.2 | 4.0 | (1) 5F5F|1|F | (0) | (3) 5F5F|1|H, 5F5F|1|D, 5F5F|1|B |
| NR_all_01232.1 | NR_3.0_40467.2 | 4.0 | (1) 5F5F|1|F | (0) | (3) 5F5F|1|H, 5F5F|1|D, 5F5F|1|B |
| NR_all_01232.1 | NR_3.5_40467.2 | 4.0 | (1) 5F5F|1|F | (0) | (3) 5F5F|1|H, 5F5F|1|D, 5F5F|1|B |
| NR_all_01232.1 | NR_4.0_40467.2 | 4.0 | (1) 5F5F|1|F | (0) | (3) 5F5F|1|H, 5F5F|1|D, 5F5F|1|B |
| NR_all_01232.1 | NR_all_40467.2 | 4.0 | (1) 5F5F|1|F | (0) | (3) 5F5F|1|H, 5F5F|1|D, 5F5F|1|B |
Heat map of mutual geometric discrepancy, in Angstroms per nucleotide. Instances are ordered to put similar structures near each other. The colorbar ranges from 0 to the maximum observed discrepancy, up to 0.5
#S - ordering by similarity (same as in the heat map).| #S | PDB | Title | Method | Resolution | Length | NAKB_NA_annotation | NAKB_protein_annotation |
|---|---|---|---|---|---|---|---|
| 1 | 5F5F|1|F | Title: X-ray structure of Roquin ROQ domain in complex with a Selex-derived hexa-loop RNA motif | X-RAY DIFFRACTION | 3 | 20 |
Coloring options: