Equivalence class NR_4.0_97900.1 Obsolete
| # | IFE | Standardized name | Molecule | Organism | Source | Rfam | Title | Method | Res. Å | Date |
|---|---|---|---|---|---|---|---|---|---|---|
| 1 | 2NR0|1|E (rep) | Transfer RNA | leucyl tRNA | RF00005 | Crystal structure of pseudoudirinde synthase TruA in complex with leucyl tRNA | X-ray diffraction | 3.9 | 2007-05-15 | ||
| 2 | 2NR0|1|G | Transfer RNA | leucyl tRNA | RF00005 | Crystal structure of pseudoudirinde synthase TruA in complex with leucyl tRNA | X-ray diffraction | 3.9 | 2007-05-15 | ||
| 3 | 2NR0|1|H | Transfer RNA | leucyl tRNA | RF00005 | Crystal structure of pseudoudirinde synthase TruA in complex with leucyl tRNA | X-ray diffraction | 3.9 | 2007-05-15 | ||
| 4 | 2NRE|1|F | Transfer RNA | leucyl tRNA | RF00005 | Crystal structure of pseudoudirinde synthase TruA in complex with leucyl tRNA | X-ray diffraction | 4 | 2007-05-15 | ||
| 5 | 4V8C|1|CB | Transfer RNA | TRNA-LEU, MRNA | RF00005 | Crystal structure analysis of ribosomal decoding (near-cognate tRNA-leu complex with paromomycin). | X-ray diffraction | 3.3 | 2014-07-09 | ||
| 6 | 4V8B|1|AB | Transfer RNA | TRNA-LEU, MRNA | Escherichia coli | Bacteria | RF00005 | Crystal structure analysis of ribosomal decoding (near-cognate tRNA-leu complex). | X-ray diffraction | 3 | 2014-07-09 |
| 7 | 2NR0|1|F | Transfer RNA | leucyl tRNA | RF00005 | Crystal structure of pseudoudirinde synthase TruA in complex with leucyl tRNA | X-ray diffraction | 3.9 | 2007-05-15 | ||
| 8 | 4V8C|1|DB | Transfer RNA | TRNA-LEU, MRNA | RF00005 | Crystal structure analysis of ribosomal decoding (near-cognate tRNA-leu complex with paromomycin). | X-ray diffraction | 3.3 | 2014-07-09 | ||
| 9 | 4V8B|1|CB | Transfer RNA | TRNA-LEU, MRNA | Escherichia coli | Bacteria | RF00005 | Crystal structure analysis of ribosomal decoding (near-cognate tRNA-leu complex). | X-ray diffraction | 3 | 2014-07-09 |
| 10 | 4V87|1|BB | Transfer RNA | TRNA-LEU, MRNA | synthetic construct | Synthetic | RF00005 | Crystal structure analysis of ribosomal decoding. | X-ray diffraction | 3.1 | 2014-07-09 |
| 11 | 4V87|1|CB | Transfer RNA | TRNA-LEU, MRNA | synthetic construct | Synthetic | RF00005 | Crystal structure analysis of ribosomal decoding. | X-ray diffraction | 3.1 | 2014-07-09 |
Release history
| Release | 2.0 |
|---|---|
| Date | 2014-12-05 |
Parents
| This class | Parent classes | Release id | Intersection | Added to this class | Only in parent |
|---|
Children
| This class | Descendant classes | Release id | Intersection | Only in this class | Added to child |
|---|
Heat map of mutual geometric discrepancy, in Angstroms per nucleotide. Instances are ordered to put similar structures near each other. The colorbar ranges from 0 to the maximum observed discrepancy, up to 0.5
#S - ordering by similarity (same as in the heat map).| #S | PDB | Title | Method | Resolution | Length | NAKB_NA_annotation | NAKB_protein_annotation |
|---|---|---|---|---|---|---|---|
| 1 | 4V8B|1|CB | Title: Crystal structure analysis of ribosomal decoding (near-cognate tRNA-leu complex). | X-RAY DIFFRACTION | 3 | 87 | ||
| 2 | 4V87|1|CB | Title: Crystal structure analysis of ribosomal decoding. | X-RAY DIFFRACTION | 3.1 | 87 | ||
| 3 | 4V8C|1|DB | Title: Crystal structure analysis of ribosomal decoding (near-cognate tRNA-leu complex with paromomycin). | X-RAY DIFFRACTION | 3.3 | 87 | ||
| 4 | 4V87|1|BB | Title: Crystal structure analysis of ribosomal decoding. | X-RAY DIFFRACTION | 3.1 | 87 | ||
| 5 | 4V8B|1|AB | Title: Crystal structure analysis of ribosomal decoding (near-cognate tRNA-leu complex). | X-RAY DIFFRACTION | 3 | 87 | ||
| 6 | 4V8C|1|CB | Title: Crystal structure analysis of ribosomal decoding (near-cognate tRNA-leu complex with paromomycin). | X-RAY DIFFRACTION | 3.3 | 87 | ||
| 7 | 2NR0|1|G | Title: Crystal structure of pseudoudirinde synthase TruA in complex with leucyl tRNA | X-RAY DIFFRACTION | 3.9 | 67 | ||
| 8 | 2NR0|1|F | Title: Crystal structure of pseudoudirinde synthase TruA in complex with leucyl tRNA | X-RAY DIFFRACTION | 3.9 | 74 | ||
| 9 | 2NR0|1|H | Title: Crystal structure of pseudoudirinde synthase TruA in complex with leucyl tRNA | X-RAY DIFFRACTION | 3.9 | 65 | ||
| 10 | 2NR0|1|E | Title: Crystal structure of pseudoudirinde synthase TruA in complex with leucyl tRNA | X-RAY DIFFRACTION | 3.9 | 81 | ||
| 11 | 2NRE|1|F | Title: Crystal structure of pseudoudirinde synthase TruA in complex with leucyl tRNA | X-RAY DIFFRACTION | 4 | 56 |
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