Equivalence class NR_4.0_91685.3 Obsolete
| # | IFE | Standardized name | Molecule | Organism | Source | Rfam | Title | Method | Res. Å | Date |
|---|---|---|---|---|---|---|---|---|---|---|
| 1 | 4JNG|1|L (rep) | RNA (42-MER) | Schmallenberg virus nucleoprotein-RNA complex | X-ray diffraction | 2.12 | 2013-07-31 | ||||
| 2 | 5UK4|1|x | RNA (45-MER) | Vicugna pacos | Eukarya | VESICULAR STOMATITS VIRUS N PROTEIN IN COMPLEX WITH INHIBITORY NANOBODY 1307 | X-ray diffraction | 3.2 | 2017-04-19 | ||
| 3 | 5UK4|1|v | RNA (45-MER) | Vicugna pacos | Eukarya | VESICULAR STOMATITS VIRUS N PROTEIN IN COMPLEX WITH INHIBITORY NANOBODY 1307 | X-ray diffraction | 3.2 | 2017-04-19 | ||
| 4 | 5UK4|1|w | RNA (45-MER) | Vicugna pacos | Eukarya | VESICULAR STOMATITS VIRUS N PROTEIN IN COMPLEX WITH INHIBITORY NANOBODY 1307 | X-ray diffraction | 3.2 | 2017-04-19 | ||
| 5 | 5UK4|1|u | RNA (45-MER) | Vicugna pacos | Eukarya | VESICULAR STOMATITS VIRUS N PROTEIN IN COMPLEX WITH INHIBITORY NANOBODY 1307 | X-ray diffraction | 3.2 | 2017-04-19 | ||
| 6 | 4BHH|1|R | POLY-URIDINE 45-MER | synthetic construct | Synthetic | Crystal structure of tetramer of La Crosse virus nucleoprotein in complex with ssRNA | X-ray diffraction | 3.4 | 2013-04-24 | ||
| 7 | 4J1G|1|E | RNA (45-MER) | Leanyer orthobunyavirus nucleoprotein-ssRNA complex | X-ray diffraction | 2.79 | 2013-04-10 | ||||
| 8 | 3ZLA|1|I | RNA | Escherichia coli | Bacteria | Crystal structure of the nucleocapsid protein from Bunyamwera virus bound to RNA | X-ray diffraction | 3.2 | 2013-05-01 | ||
| 9 | 3ZLA|1|J | RNA | Escherichia coli | Bacteria | Crystal structure of the nucleocapsid protein from Bunyamwera virus bound to RNA | X-ray diffraction | 3.2 | 2013-05-01 | ||
| 10 | 3PU4|1|R | RNA (45-MER) | synthetic construct | Synthetic | Crystal Structure of a vesicular stomatitis virus nucleocapsid-polyU complex | X-ray diffraction | 3 | 2011-01-12 | ||
| 11 | 2GIC|1|R | 45-MER | Crystal Structure of a vesicular stomatitis virus nucleocapsid-RNA complex | X-ray diffraction | 2.92 | 2006-08-22 | ||||
| 12 | 3HHZ|1|R | RNA (45-MER) | Escherichia coli | Bacteria | Complex of the vesicular stomatitis virus nucleocapsid and the nucleocapsid-binding domain of the phosphoprotein | X-ray diffraction | 3.5 | 2009-07-28 | ||
| 13 | 6BJY|1|R | RNA (45-MER) | Indiana vesiculovirus | Viruses | VSV Nucleocapsid with Polyamide Bound | X-ray diffraction | 3.46 | 2018-02-28 |
Parents
Heat map of mutual geometric discrepancy, in Angstroms per nucleotide. Instances are ordered to put similar structures near each other. The colorbar ranges from 0 to the maximum observed discrepancy, up to 0.5
#S - ordering by similarity (same as in the heat map).| #S | PDB | Title | Method | Resolution | Length | NAKB_NA_annotation | NAKB_protein_annotation |
|---|---|---|---|---|---|---|---|
| 1 | 5UK4|1|x | Title: VESICULAR STOMATITS VIRUS N PROTEIN IN COMPLEX WITH INHIBITORY NANOBODY 1307 | X-RAY DIFFRACTION | 3.2 | 45 | ||
| 2 | 5UK4|1|w | Title: VESICULAR STOMATITS VIRUS N PROTEIN IN COMPLEX WITH INHIBITORY NANOBODY 1307 | X-RAY DIFFRACTION | 3.2 | 45 | ||
| 3 | 5UK4|1|v | Title: VESICULAR STOMATITS VIRUS N PROTEIN IN COMPLEX WITH INHIBITORY NANOBODY 1307 | X-RAY DIFFRACTION | 3.2 | 45 | ||
| 4 | 5UK4|1|u | Title: VESICULAR STOMATITS VIRUS N PROTEIN IN COMPLEX WITH INHIBITORY NANOBODY 1307 | X-RAY DIFFRACTION | 3.2 | 45 | ||
| 5 | 3PU4|1|R | Title: Crystal Structure of a vesicular stomatitis virus nucleocapsid-polyU complex | X-RAY DIFFRACTION | 3 | 45 | ||
| 6 | 3HHZ|1|R | Title: Complex of the vesicular stomatitis virus nucleocapsid and the nucleocapsid-binding domain of the phosphoprotein | X-RAY DIFFRACTION | 3.5 | 45 | ||
| 7 | 2GIC|1|R | Title: Crystal Structure of a vesicular stomatitis virus nucleocapsid-RNA complex | X-RAY DIFFRACTION | 2.92 | 45 | ||
| 8 | 6BJY|1|R | Title: VSV Nucleocapsid with Polyamide Bound | X-RAY DIFFRACTION | 3.46 | 45 | ||
| 9 | 4JNG|1|L | Title: Schmallenberg virus nucleoprotein-RNA complex | X-RAY DIFFRACTION | 2.12 | 42 | ||
| 10 | 3ZLA|1|J | Title: Crystal structure of the nucleocapsid protein from Bunyamwera virus bound to RNA | X-RAY DIFFRACTION | 3.2 | 44 | ||
| 11 | 3ZLA|1|I | Title: Crystal structure of the nucleocapsid protein from Bunyamwera virus bound to RNA | X-RAY DIFFRACTION | 3.2 | 44 | ||
| 12 | 4J1G|1|E | Title: Leanyer orthobunyavirus nucleoprotein-ssRNA complex | X-RAY DIFFRACTION | 2.79 | 45 | ||
| 13 | 4BHH|1|R | Title: Crystal structure of tetramer of La Crosse virus nucleoprotein in complex with ssRNA | X-RAY DIFFRACTION | 3.4 | 44 |
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