Equivalence class NR_4.0_91654.1 Obsolete
| # | IFE | Standardized name | Molecule | Organism | Source | Rfam | Title | Method | Res. Å | Date |
|---|---|---|---|---|---|---|---|---|---|---|
| 1 | 3GIB|1|H (rep) | 5'-R(P*AP*AP*AP*AP*AP*AP*AP*AP*A)-3' | Crystal Structure of the Complex of the E. coli Hfq with Poly(A) | X-ray diffraction | 2.4 | 2009-11-17 | ||||
| 2 | 4TYY|1|B | RNA (5'-R(P*AP*AP*AP*AP*AP*AP*AP*AP*A)-3') | Saccharomyces cerevisiae | Eukarya | DEAD-box helicase Mss116 bound to ssRNA and CDP-BeF | X-ray diffraction | 2.74 | 2014-12-31 | ||
| 3 | 4B3G|1|G | RNA (5'-(AP*AP*AP*AP*AP*AP*AP*AP*AP)-3') | crystal structure of Ighmbp2 helicase in complex with RNA | X-ray diffraction | 2.85 | 2012-09-26 | ||||
| 4 | 4B3G|1|H | RNA (5'-(AP*AP*AP*AP*AP*AP*AP*AP*AP)-3') | crystal structure of Ighmbp2 helicase in complex with RNA | X-ray diffraction | 2.85 | 2012-09-26 |
Release history
| Release | 4.0 |
|---|---|
| Date | 2016-07-25 |
Parents
| This class | Parent classes | Release id | Intersection | Added to this class | Only in parent |
|---|---|---|---|---|---|
| NR_4.0_91654.1 | NR_all_13302.1 | 4.0 | (1) 4B3G|1|H | (3) 4TYY|1|B, 4B3G|1|G, 3GIB|1|H | (0) |
| NR_4.0_91654.1 | NR_all_19565.1 | 4.0 | (1) 4B3G|1|G | (3) 4TYY|1|B, 4B3G|1|H, 3GIB|1|H | (0) |
| NR_4.0_91654.1 | NR_all_41729.1 | 4.0 | (1) 3GIB|1|H | (3) 4TYY|1|B, 4B3G|1|H, 4B3G|1|G | (0) |
| NR_4.0_91654.1 | NR_all_54625.1 | 4.0 | (1) 4TYY|1|B | (3) 4B3G|1|H, 4B3G|1|G, 3GIB|1|H | (0) |
Children
| This class | Descendant classes | Release id | Intersection | Only in this class | Added to child |
|---|
Heat map of mutual geometric discrepancy, in Angstroms per nucleotide. Instances are ordered to put similar structures near each other. The colorbar ranges from 0 to the maximum observed discrepancy, up to 0.5
#S - ordering by similarity (same as in the heat map).| #S | PDB | Title | Method | Resolution | Length | NAKB_NA_annotation | NAKB_protein_annotation |
|---|---|---|---|---|---|---|---|
| 1 | 4TYY|1|B | Title: DEAD-box helicase Mss116 bound to ssRNA and CDP-BeF | X-RAY DIFFRACTION | 2.74 | 9 | ||
| 2 | 4B3G|1|H | Title: crystal structure of Ighmbp2 helicase in complex with RNA | X-RAY DIFFRACTION | 2.85 | 8 | ||
| 3 | 4B3G|1|G | Title: crystal structure of Ighmbp2 helicase in complex with RNA | X-RAY DIFFRACTION | 2.85 | 9 | ||
| 4 | 3GIB|1|H | Title: Crystal Structure of the Complex of the E. coli Hfq with Poly(A) | X-RAY DIFFRACTION | 2.4 | 9 |
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