Equivalence class NR_4.0_90941.1 Obsolete
| # | IFE | Standardized name | Molecule | Organism | Source | Rfam | Title | Method | Res. Å | Date |
|---|---|---|---|---|---|---|---|---|---|---|
| 1 | 2DR8|1|B (rep) | tRNA (33-MER) | Complex structure of CCA-adding enzyme with tRNAminiDC and CTP | X-ray diffraction | 2.5 | 2006-11-14 | ||||
| 2 | 2ZH6|1|B | tRNA (34-MER) | Complex structure of AFCCA with tRNAminiDCU and ATP | X-ray diffraction | 2.5 | 2008-08-05 | ||||
| 3 | 2DRB|1|B | tRNA (35-MER) | Complex structure of CCA-adding enzyme with tRNAminiCCA | X-ray diffraction | 2.8 | 2006-11-14 | ||||
| 4 | 2DR5|1|B | tRNA (32-MER) | Complex structure of CCA adding enzyme with mini-helix lacking CCA | X-ray diffraction | 2.8 | 2006-10-31 |
Release history
| Release | 6.0 |
|---|---|
| Date | 2017-04-04 |
Parents
| This class | Parent classes | Release id | Intersection | Added to this class | Only in parent |
|---|---|---|---|---|---|
| NR_4.0_90941.1 | NR_4.0_03522.1 | 6.0 | (1) 2DR5|1|B | (3) 2DR8|1|B, 2ZH6|1|B, 2DRB|1|B | (0) |
| NR_4.0_90941.1 | NR_4.0_35253.1 | 6.0 | (1) 2DRB|1|B | (3) 2DR8|1|B, 2DR5|1|B, 2ZH6|1|B | (0) |
| NR_4.0_90941.1 | NR_4.0_71238.1 | 6.0 | (1) 2ZH6|1|B | (3) 2DRB|1|B, 2DR5|1|B, 2DR8|1|B | (9) 2ZHB|1|B, 2ZH2|1|B, 2ZH8|1|B, 2DVI|1|B, 2ZH5|1|B, 2DRA|1|B, 2ZH4|1|B, 2DR9|1|B, 2ZH3|1|B |
| NR_4.0_90941.1 | NR_4.0_88360.1 | 6.0 | (1) 2DR8|1|B | (3) 2DRB|1|B, 2DR5|1|B, 2ZH6|1|B | (5) 2ZH9|1|B, 2ZH7|1|B, 2ZH1|1|B, 2DR7|1|B, 2ZHA|1|B |
Children
| This class | Descendant classes | Release id | Intersection | Only in this class | Added to child |
|---|---|---|---|---|---|
| NR_4.0_90941.1 | NR_4.0_10732.1 | 7.0 | (4) 2DR5|1|B, 2DR8|1|B, 2DRB|1|B, 2ZH6|1|B | (0) | (14) 2DRA|1|B, 2ZH1|1|B, 2ZH3|1|B, 2ZH5|1|B, 2DR9|1|B, 2DVI|1|B, 2ZH2|1|B, 2ZH4|1|B, 2DR7|1|B, 2ZHB|1|B, 2ZHA|1|B, 2ZH9|1|B, 2ZH8|1|B, 2ZH7|1|B |
Heat map of mutual geometric discrepancy, in Angstroms per nucleotide. Instances are ordered to put similar structures near each other. The colorbar ranges from 0 to the maximum observed discrepancy, up to 0.5
#S - ordering by similarity (same as in the heat map).| #S | PDB | Title | Method | Resolution | Length | NAKB_NA_annotation | NAKB_protein_annotation |
|---|---|---|---|---|---|---|---|
| 1 | 2ZH6|1|B | Title: Complex structure of AFCCA with tRNAminiDCU and ATP | X-RAY DIFFRACTION | 2.5 | 34 | ||
| 2 | 2DRB|1|B | Title: Complex structure of CCA-adding enzyme with tRNAminiCCA | X-RAY DIFFRACTION | 2.8 | 35 | ||
| 3 | 2DR8|1|B | Title: Complex structure of CCA-adding enzyme with tRNAminiDC and CTP | X-RAY DIFFRACTION | 2.5 | 33 | ||
| 4 | 2DR5|1|B | Title: Complex structure of CCA adding enzyme with mini-helix lacking CCA | X-RAY DIFFRACTION | 2.8 | 32 |
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