Equivalence class NR_4.0_89833.1 Obsolete
| # | IFE | Standardized name | Molecule | Organism | Source | Rfam | Title | Method | Res. Å | Date |
|---|---|---|---|---|---|---|---|---|---|---|
| 1 | 1J8G|1|D (rep) | 5'-R(*UP*GP*GP*GP*GP*U)-3' | X-ray Analysis of a RNA Tetraplex r(uggggu)4 at Ultra-High Resolution | X-ray diffraction | 0.61 | 2001-11-23 | ||||
| 2 | 1J8G|1|C | 5'-R(*UP*GP*GP*GP*GP*U)-3' | X-ray Analysis of a RNA Tetraplex r(uggggu)4 at Ultra-High Resolution | X-ray diffraction | 0.61 | 2001-11-23 | ||||
| 3 | 1J8G|1|A | 5'-R(*UP*GP*GP*GP*GP*U)-3' | X-ray Analysis of a RNA Tetraplex r(uggggu)4 at Ultra-High Resolution | X-ray diffraction | 0.61 | 2001-11-23 | ||||
| 4 | 4RKV|1|A | RNA (5'-R(*UP*GP*GP*GP*GP*U)-3') | synthetic construct | Synthetic | Structural variations and solvent structure of UGGGGU quadruplexes stabilized by Sr2+ ions | X-ray diffraction | 0.88 | 2014-11-19 | ||
| 5 | 4RJ1|1|A | RNA (5'-R(*UP*GP*GP*GP*GP*U)-3') | synthetic construct | Synthetic | Structural variations and solvent structure of UGGGGU quadruplexes stabilized by Sr2+ ions | X-ray diffraction | 0.92 | 2014-11-12 | ||
| 6 | 4XK0|1|C | RNA (5'-(*UP*GP*GP*GP*GP*U)-3') | synthetic construct | Synthetic | Crystal structure of a tetramolecular RNA G-quadruplex in potassium | X-ray diffraction | 1.08 | 2015-02-11 |
Heat map of mutual geometric discrepancy, in Angstroms per nucleotide. Instances are ordered to put similar structures near each other. The colorbar ranges from 0 to the maximum observed discrepancy, up to 0.5
#S - ordering by similarity (same as in the heat map).| #S | PDB | Title | Method | Resolution | Length | NAKB_NA_annotation | NAKB_protein_annotation |
|---|---|---|---|---|---|---|---|
| 1 | 1J8G|1|D | Title: X-ray Analysis of a RNA Tetraplex r(uggggu)4 at Ultra-High Resolution | X-RAY DIFFRACTION | 0.61 | 6 | ||
| 2 | 4RJ1|1|A | Title: Structural variations and solvent structure of UGGGGU quadruplexes stabilized by Sr2+ ions | X-RAY DIFFRACTION | 0.92 | 6 | ||
| 3 | 1J8G|1|C | Title: X-ray Analysis of a RNA Tetraplex r(uggggu)4 at Ultra-High Resolution | X-RAY DIFFRACTION | 0.61 | 6 | ||
| 4 | 4RKV|1|A | Title: Structural variations and solvent structure of UGGGGU quadruplexes stabilized by Sr2+ ions | X-RAY DIFFRACTION | 0.88 | 10 | ||
| 5 | 1J8G|1|A | Title: X-ray Analysis of a RNA Tetraplex r(uggggu)4 at Ultra-High Resolution | X-RAY DIFFRACTION | 0.61 | 6 | ||
| 6 | 4XK0|1|C | Title: Crystal structure of a tetramolecular RNA G-quadruplex in potassium | X-RAY DIFFRACTION | 1.08 | 6 |
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