Equivalence class NR_4.0_89221.2 Obsolete
| # | IFE | Standardized name | Molecule | Organism | Source | Rfam | Title | Method | Res. Å | Date |
|---|---|---|---|---|---|---|---|---|---|---|
| 1 | 2G3S|1|I+ 2G3S|1|J (rep) | 5'-R(*GP*GP*CP*GP*UP*GP*CP*C)-3' | RNA structure containing GU base pairs | X-ray diffraction | 1.5 | 2007-01-16 | ||||
| 2 | 2G3S|1|G+ 2G3S|1|H | 5'-R(*GP*GP*CP*GP*UP*GP*CP*C)-3' | RNA structure containing GU base pairs | X-ray diffraction | 1.5 | 2007-01-16 | ||||
| 3 | 2G3S|1|E+ 2G3S|1|F | 5'-R(*GP*GP*CP*GP*UP*GP*CP*C)-3' | RNA structure containing GU base pairs | X-ray diffraction | 1.5 | 2007-01-16 | ||||
| 4 | 2G3S|1|C+ 2G3S|1|D | 5'-R(*GP*GP*CP*GP*UP*GP*CP*C)-3' | RNA structure containing GU base pairs | X-ray diffraction | 1.5 | 2007-01-16 | ||||
| 5 | 2G3S|1|A+ 2G3S|1|B | 5'-R(*GP*GP*CP*GP*UP*GP*CP*C)-3' | RNA structure containing GU base pairs | X-ray diffraction | 1.5 | 2007-01-16 |
Parents
| This class | Parent classes | Release id | Intersection | Added to this class | Only in parent |
|---|---|---|---|---|---|
| NR_4.0_89221.2 | NR_4.0_89221.1 | 6.0 | (5) 2G3S|1|A+2G3S|1|B, 2G3S|1|C+2G3S|1|D, 2G3S|1|E+2G3S|1|F, 2G3S|1|G+2G3S|1|H, 2G3S|1|I+2G3S|1|J | (0) | (0) |
Children
| This class | Descendant classes | Release id | Intersection | Only in this class | Added to child |
|---|---|---|---|---|---|
| NR_4.0_89221.2 | NR_4.0_89221.3 | 8.0 | (5) 2G3S|1|A+2G3S|1|B, 2G3S|1|C+2G3S|1|D, 2G3S|1|E+2G3S|1|F, 2G3S|1|G+2G3S|1|H, 2G3S|1|I+2G3S|1|J | (0) | (0) |
Heat map of mutual geometric discrepancy, in Angstroms per nucleotide. Instances are ordered to put similar structures near each other. The colorbar ranges from 0 to the maximum observed discrepancy, up to 0.5
#S - ordering by similarity (same as in the heat map).| #S | PDB | Title | Method | Resolution | Length | NAKB_NA_annotation | NAKB_protein_annotation |
|---|---|---|---|---|---|---|---|
| 1 | 2G3S|1|I+2G3S|1|J | Title: RNA structure containing GU base pairs | X-RAY DIFFRACTION | 1.5 | 8 | ||
| 2 | 2G3S|1|G+2G3S|1|H | Title: RNA structure containing GU base pairs | X-RAY DIFFRACTION | 1.5 | 8 | ||
| 3 | 2G3S|1|A+2G3S|1|B | Title: RNA structure containing GU base pairs | X-RAY DIFFRACTION | 1.5 | 8 | ||
| 4 | 2G3S|1|C+2G3S|1|D | Title: RNA structure containing GU base pairs | X-RAY DIFFRACTION | 1.5 | 8 | ||
| 5 | 2G3S|1|E+2G3S|1|F | Title: RNA structure containing GU base pairs | X-RAY DIFFRACTION | 1.5 | 8 |
Coloring options: