Equivalence class NR_4.0_89028.1 Current
| # | IFE | Standardized name | Molecule | Organism | Source | Rfam | Title | Method | Res. Å | Date |
|---|---|---|---|---|---|---|---|---|---|---|
| 1 | 6DLR|1|A (rep) | Guanidine-I riboswitch | PRPP Riboswitch | Syntrophothermus lipocalidus | Bacteria | RF00442 | PRPP Riboswitch bound to PRPP, iridium-hexamine soaked structure | X-ray diffraction | 2.66 | 2018-11-14 |
| 2 | 6DLT|1|A | Guanidine-I riboswitch | PRPP Riboswitch | Syntrophothermus lipocalidus | Bacteria | RF00442 | PRPP Riboswitch bound to PRPP, native structure | X-ray diffraction | 2.9 | 2018-11-14 |
| 3 | 6DLS|1|A | Guanidine-I riboswitch | PRPP Riboswitch | Syntrophothermus lipocalidus | Bacteria | RF00442 | PRPP Riboswitch bound to PRPP, thallium acetate soaked structure | X-ray diffraction | 2.88 | 2018-11-14 |
| 4 | 6DLQ|1|A | Guanidine-I riboswitch | PRPP Riboswitch | Syntrophothermus lipocalidus | Bacteria | RF00442 | PRPP Riboswitch bound to PRPP, manganese chloride soaked structure | X-ray diffraction | 2.8 | 2018-11-14 |
| 5 | 6DNR|1|A | Guanidine-I riboswitch | PRPP Riboswitch | Syntrophothermus lipocalidus | Bacteria | RF00442 | PRPP Riboswitch bound to PRPP, ligand-free structure | X-ray diffraction | 2.9 | 2018-11-14 |
Release history
Parents
| This class | Parent classes | Release id | Intersection | Added to this class | Only in parent |
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Children
| This class | Descendant classes | Release id | Intersection | Only in this class | Added to child |
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Heat map of mutual geometric discrepancy, in Angstroms per nucleotide. Instances are ordered to put similar structures near each other. The colorbar ranges from 0 to the maximum observed discrepancy, up to 0.5
#S - ordering by similarity (same as in the heat map).| #S | PDB | Title | Method | Resolution | Length | NAKB_NA_annotation | NAKB_protein_annotation |
|---|---|---|---|---|---|---|---|
| 1 | 6DLQ|1|A | Title: PRPP Riboswitch bound to PRPP, manganese chloride soaked structure | X-RAY DIFFRACTION | 2.8 | 105 | ||
| 2 | 6DLT|1|A | Title: PRPP Riboswitch bound to PRPP, native structure | X-RAY DIFFRACTION | 2.9 | 105 | ||
| 3 | 6DLS|1|A | Title: PRPP Riboswitch bound to PRPP, thallium acetate soaked structure | X-RAY DIFFRACTION | 2.88 | 105 | ||
| 4 | 6DLR|1|A | Title: PRPP Riboswitch bound to PRPP, iridium-hexamine soaked structure | X-RAY DIFFRACTION | 2.66 | 106 | ||
| 5 | 6DNR|1|A | Title: PRPP Riboswitch bound to PRPP, ligand-free structure | X-RAY DIFFRACTION | 2.9 | 105 |
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