Equivalence class NR_4.0_88002.1 Obsolete
| # | IFE | Standardized name | Molecule | Organism | Source | Rfam | Title | Method | Res. Å | Date |
|---|---|---|---|---|---|---|---|---|---|---|
| 1 | 1IBL|1|Y+ 1IBL|1|Z (rep) | ANTICODON STEM-LOOP OF PHENYLALANINE TRANSFER RNA, A-SITE MESSENGER RNA FRAGMENT | STRUCTURE OF THE THERMUS THERMOPHILUS 30S RIBOSOMAL SUBUNIT IN COMPLEX WITH A MESSENGER RNA FRAGMENT AND COGNATE TRANSFER RNA ANTICODON STEM-LOOP BOUND AT THE A SITE AND WITH THE ANTIBIOTIC PAROMOMYCIN | X-ray diffraction | 3.11 | 2001-05-04 |
Release history
| Release | 6.0 |
|---|---|
| Date | 2017-04-04 |
Parents
| This class | Parent classes | Release id | Intersection | Added to this class | Only in parent |
|---|---|---|---|---|---|
| NR_4.0_88002.1 | NR_4.0_09054.1 | 6.0 | (1) 1IBL|1|Y+1IBL|1|Z | (0) | (4) 1IBM|1|Y+1IBM|1|Z, 4AQY|1|Z+4AQY|1|W, 4DR4|1|W+4DR4|1|V, 4DR5|1|W+4DR5|1|V |
Children
| This class | Descendant classes | Release id | Intersection | Only in this class | Added to child |
|---|---|---|---|---|---|
| NR_4.0_88002.1 | NR_4.0_27071.1 | 7.0 | (1) 1IBL|1|Y+1IBL|1|Z | (0) | (4) 1IBM|1|Y+1IBM|1|Z, 4AQY|1|Z+4AQY|1|W, 4DR4|1|W+4DR4|1|V, 4DR5|1|W+4DR5|1|V |
Heat map of mutual geometric discrepancy, in Angstroms per nucleotide. Instances are ordered to put similar structures near each other. The colorbar ranges from 0 to the maximum observed discrepancy, up to 0.5
#S - ordering by similarity (same as in the heat map).| #S | PDB | Title | Method | Resolution | Length | NAKB_NA_annotation | NAKB_protein_annotation |
|---|---|---|---|---|---|---|---|
| 1 | 1IBL|1|Y+1IBL|1|Z | Title: STRUCTURE OF THE THERMUS THERMOPHILUS 30S RIBOSOMAL SUBUNIT IN COMPLEX WITH A MESSENGER RNA FRAGMENT AND COGNATE TRANSFER RNA ANTICODON STEM-LOOP BOUND AT THE A SITE AND WITH THE ANTIBIOTIC PAROMOMYCIN | X-RAY DIFFRACTION | 3.11 | 15 |
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