Equivalence class NR_4.0_86986.1 Obsolete
# | IFE | Standardized name | Molecule | Organism | Source | Rfam | Title | Method | Res. Å | Date |
---|---|---|---|---|---|---|---|---|---|---|
1 | 4KR7|1|X (rep) | RNA (39-MER) | Crystal structure of a 4-thiouridine synthetase - RNA complex with bound ATP | X-ray diffraction | 3.42 | 2014-04-23 | ||||
2 | 2ZY6|1|A | phenylalanyl transfer RNA | Crystal structure of a truncated tRNA, TPHE39A | X-ray diffraction | 1.75 | 2009-06-30 | ||||
3 | 4KR7|1|M | RNA (39-MER) | Crystal structure of a 4-thiouridine synthetase - RNA complex with bound ATP | X-ray diffraction | 3.42 | 2014-04-23 | ||||
4 | 4KR9|1|X | RNA (39-MER) | Crystal structure of a 4-thiouridine synthetase - RNA complex at 3.5 Angstrom resolution | X-ray diffraction | 3.5 | 2014-04-23 | ||||
5 | 4KR9|1|M | RNA (39-MER) | Crystal structure of a 4-thiouridine synthetase - RNA complex at 3.5 Angstrom resolution | X-ray diffraction | 3.5 | 2014-04-23 | ||||
6 | 4KR6|1|C | RNA (39-MER) | Crystal structure of a 4-thiouridine synthetase - RNA complex | X-ray diffraction | 2.85 | 2014-04-23 | ||||
7 | 4KR6|1|D | RNA (39-MER) | Crystal structure of a 4-thiouridine synthetase - RNA complex | X-ray diffraction | 2.85 | 2014-04-23 |
Release history
Release | 4.0 |
---|---|
Date | 2016-07-25 |
Parents
This class | Parent classes | Release id | Intersection | Added to this class | Only in parent |
---|---|---|---|---|---|
NR_4.0_86986.1 | NR_all_17208.1 | 4.0 | (1) 4KR6|1|D | (6) 4KR9|1|X, 4KR9|1|M, 4KR7|1|X, 4KR7|1|M, 4KR6|1|C, 2ZY6|1|A | (0) |
NR_4.0_86986.1 | NR_all_19092.1 | 4.0 | (1) 4KR6|1|C | (6) 4KR9|1|X, 4KR9|1|M, 4KR7|1|X, 4KR7|1|M, 4KR6|1|D, 2ZY6|1|A | (0) |
NR_4.0_86986.1 | NR_all_36246.1 | 4.0 | (1) 2ZY6|1|A | (6) 4KR9|1|X, 4KR9|1|M, 4KR7|1|X, 4KR7|1|M, 4KR6|1|D, 4KR6|1|C | (0) |
NR_4.0_86986.1 | NR_all_37942.1 | 4.0 | (2) 4KR7|1|M, 4KR9|1|M | (5) 2ZY6|1|A, 4KR9|1|X, 4KR7|1|X, 4KR6|1|D, 4KR6|1|C | (0) |
NR_4.0_86986.1 | NR_all_61812.1 | 4.0 | (2) 4KR9|1|X, 4KR7|1|X | (5) 4KR9|1|M, 4KR7|1|M, 4KR6|1|D, 4KR6|1|C, 2ZY6|1|A | (0) |
Children
This class | Descendant classes | Release id | Intersection | Only in this class | Added to child |
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Heat map of mutual geometric discrepancy, in Angstroms per nucleotide. Instances are ordered to put similar structures near each other. The colorbar ranges from 0 to the maximum observed discrepancy, up to 0.5
#S - ordering by similarity (same as in the heat map).#S | PDB | Title | Method | Resolution | Length | NAKB_NA_annotation | NAKB_protein_annotation |
---|---|---|---|---|---|---|---|
1 | 4KR6|1|D | Title: Crystal structure of a 4-thiouridine synthetase - RNA complex | X-RAY DIFFRACTION | 2.85 | 39 | ||
2 | 4KR9|1|X | Title: Crystal structure of a 4-thiouridine synthetase - RNA complex at 3.5 Angstrom resolution | X-RAY DIFFRACTION | 3.5 | 39 | ||
3 | 4KR7|1|X | Title: Crystal structure of a 4-thiouridine synthetase - RNA complex with bound ATP | X-RAY DIFFRACTION | 3.42 | 39 | ||
4 | 4KR7|1|M | Title: Crystal structure of a 4-thiouridine synthetase - RNA complex with bound ATP | X-RAY DIFFRACTION | 3.42 | 39 | ||
5 | 4KR9|1|M | Title: Crystal structure of a 4-thiouridine synthetase - RNA complex at 3.5 Angstrom resolution | X-RAY DIFFRACTION | 3.5 | 39 | ||
6 | 4KR6|1|C | Title: Crystal structure of a 4-thiouridine synthetase - RNA complex | X-RAY DIFFRACTION | 2.85 | 39 | ||
7 | 2ZY6|1|A | Title: Crystal structure of a truncated tRNA, TPHE39A | X-RAY DIFFRACTION | 1.75 | 38 |
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