Equivalence class NR_4.0_86954.1 Current
# | IFE | Standardized name | Molecule | Organism | Source | Rfam | Title | Method | Res. Å | Date |
---|---|---|---|---|---|---|---|---|---|---|
1 | 6CHR|1|A (rep) | Group II catalytic intron | RNA (621-MER), RNA (5'-R(P*UP*GP*UP*UP*UP*AP*UP*UP*AP*AP*AP*AP*A)-3') | Pylaiella littoralis | Eukarya | RF00029 | Crystal structure of a group II intron lariat with an intact 3' splice site (pre-2s state) | X-ray diffraction | 3.7 | 2018-11-21 |
2 | 6CIH|1|A | Group II catalytic intron | RNA (696-MER), RNA (5'-R(P*UP*GP*UP*UP*UP*AP*UP*UP*AP*AP*AP*AP*AP*C*-3') | Pylaiella littoralis | Eukarya | RF00029 | Crystal structure of a group II intron lariat in the post-catalytic state | X-ray diffraction | 3.68 | 2018-11-21 |
3 | 4R0D|1|A | Group II catalytic intron | GROUP IIB INTRON LARIAT, LIGATED EXONS | Pylaiella littoralis | Eukarya | RF00029 | Crystal structure of a eukaryotic group II intron lariat | X-ray diffraction | 3.68 | 2014-10-01 |
Release history
Parents
This class | Parent classes | Release id | Intersection | Added to this class | Only in parent |
---|---|---|---|---|---|
NR_4.0_86954.1 | NR_4.0_56682.1 | 9.17 | (1) 4R0D|1|A | (2) 6CHR|1|A, 6CIH|1|A | (0) |
Children
This class | Descendant classes | Release id | Intersection | Only in this class | Added to child |
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Heat map of mutual geometric discrepancy, in Angstroms per nucleotide. Instances are ordered to put similar structures near each other. The colorbar ranges from 0 to the maximum observed discrepancy, up to 0.5
#S - ordering by similarity (same as in the heat map).#S | PDB | Title | Method | Resolution | Length | NAKB_NA_annotation | NAKB_protein_annotation |
---|---|---|---|---|---|---|---|
1 | 6CIH|1|A | Title: Crystal structure of a group II intron lariat in the post-catalytic state | X-RAY DIFFRACTION | 3.68 | 616 | ||
2 | 4R0D|1|A | Title: Crystal structure of a eukaryotic group II intron lariat | X-RAY DIFFRACTION | 3.68 | 617 | ||
3 | 6CHR|1|A | Title: Crystal structure of a group II intron lariat with an intact 3' splice site (pre-2s state) | X-RAY DIFFRACTION | 3.7 | 621 |
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