Equivalence class NR_4.0_85521.1 Obsolete
| # | IFE | Standardized name | Molecule | Organism | Source | Rfam | Title | Method | Res. Å | Date |
|---|---|---|---|---|---|---|---|---|---|---|
| 1 | 4LCK|1|E (rep) | Transfer RNA | tRNA-Gly | Oceanobacillus iheyensis | Bacteria | RF00005 | Co-crystal structure of a T-box riboswitch stem I domain in complex with its cognate tRNA | X-ray diffraction | 3.2 | 2013-07-31 |
| 2 | 4TZZ|1|K | Transfer RNA | engineered tRNAGly | Bacillus subtilis | Bacteria | RF00005 | Co-crystals of the Ternary Complex Containing a T-box Stem I RNA, its Cognate tRNAGly, and B. subtilis YbxF protein, treated by removing lithium sulfate and increasing PEG3350 concentration from 20% to 45% post crystallization | X-ray diffraction | 3.64 | 2014-09-10 |
| 3 | 4TZZ|1|H | Transfer RNA | engineered tRNAGly | Bacillus subtilis | Bacteria | RF00005 | Co-crystals of the Ternary Complex Containing a T-box Stem I RNA, its Cognate tRNAGly, and B. subtilis YbxF protein, treated by removing lithium sulfate and increasing PEG3350 concentration from 20% to 45% post crystallization | X-ray diffraction | 3.64 | 2014-09-10 |
| 4 | 4LCK|1|B | Transfer RNA | tRNA-Gly | Oceanobacillus iheyensis | Bacteria | RF00005 | Co-crystal structure of a T-box riboswitch stem I domain in complex with its cognate tRNA | X-ray diffraction | 3.2 | 2013-07-31 |
| 5 | 4TZZ|1|E | Transfer RNA | engineered tRNAGly | Bacillus subtilis | Bacteria | RF00005 | Co-crystals of the Ternary Complex Containing a T-box Stem I RNA, its Cognate tRNAGly, and B. subtilis YbxF protein, treated by removing lithium sulfate and increasing PEG3350 concentration from 20% to 45% post crystallization | X-ray diffraction | 3.64 | 2014-09-10 |
| 6 | 4TZZ|1|B | Transfer RNA | engineered tRNAGly | Bacillus subtilis | Bacteria | RF00005 | Co-crystals of the Ternary Complex Containing a T-box Stem I RNA, its Cognate tRNAGly, and B. subtilis YbxF protein, treated by removing lithium sulfate and increasing PEG3350 concentration from 20% to 45% post crystallization | X-ray diffraction | 3.64 | 2014-09-10 |
Parents
Heat map of mutual geometric discrepancy, in Angstroms per nucleotide. Instances are ordered to put similar structures near each other. The colorbar ranges from 0 to the maximum observed discrepancy, up to 0.5
#S - ordering by similarity (same as in the heat map).| #S | PDB | Title | Method | Resolution | Length | NAKB_NA_annotation | NAKB_protein_annotation |
|---|---|---|---|---|---|---|---|
| 1 | 4LCK|1|E | Title: Co-crystal structure of a T-box riboswitch stem I domain in complex with its cognate tRNA | X-RAY DIFFRACTION | 3.2 | 75 | ||
| 2 | 4LCK|1|B | Title: Co-crystal structure of a T-box riboswitch stem I domain in complex with its cognate tRNA | X-RAY DIFFRACTION | 3.2 | 75 | ||
| 3 | 4TZZ|1|E | Title: Co-crystals of the Ternary Complex Containing a T-box Stem I RNA, its Cognate tRNAGly, and B. subtilis YbxF protein, treated by removing lithium sulfate and increasing PEG3350 concentration from 20% to 45% post crystallization | X-RAY DIFFRACTION | 3.64 | 75 | ||
| 4 | 4TZZ|1|B | Title: Co-crystals of the Ternary Complex Containing a T-box Stem I RNA, its Cognate tRNAGly, and B. subtilis YbxF protein, treated by removing lithium sulfate and increasing PEG3350 concentration from 20% to 45% post crystallization | X-RAY DIFFRACTION | 3.64 | 75 | ||
| 5 | 4TZZ|1|K | Title: Co-crystals of the Ternary Complex Containing a T-box Stem I RNA, its Cognate tRNAGly, and B. subtilis YbxF protein, treated by removing lithium sulfate and increasing PEG3350 concentration from 20% to 45% post crystallization | X-RAY DIFFRACTION | 3.64 | 75 | ||
| 6 | 4TZZ|1|H | Title: Co-crystals of the Ternary Complex Containing a T-box Stem I RNA, its Cognate tRNAGly, and B. subtilis YbxF protein, treated by removing lithium sulfate and increasing PEG3350 concentration from 20% to 45% post crystallization | X-RAY DIFFRACTION | 3.64 | 75 |
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