Equivalence class NR_4.0_83700.1 Obsolete
| # | IFE | Standardized name | Molecule | Organism | Source | Rfam | Title | Method | Res. Å | Date |
|---|---|---|---|---|---|---|---|---|---|---|
| 1 | 3CGP|1|B+ 3CGP|1|A (rep) | RNA (5'-R(*GP*CP*GP*CP*GP*(PSU)P*AP*GP*UP*AP*GP*C)-3'), RNA (5'-R(*CP*GP*CP*UP*AP*CP*UP*AP*AP*CP*GP*CP*G)-3') | X-ray structure of a pseudouridine-containing yeast spliceosomal U2 snRNA-intron branch site duplex bound to iodide ions | X-ray diffraction | 1.57 | 2008-07-01 | ||||
| 2 | 3CGQ|1|B+ 3CGQ|1|A | RNA (5'-R(*GP*CP*GP*CP*GP*(PSU)P*AP*GP*UP*AP*GP*C)-3'), RNA (5'-R(*CP*GP*CP*UP*AP*CP*UP*AP*AP*CP*GP*CP*G)-3') | X-ray structure of a pseudouridine-containing yeast spliceosomal U2 snRNA-intron branch site duplex | X-ray diffraction | 2.55 | 2008-07-01 |
Parents
| This class | Parent classes | Release id | Intersection | Added to this class | Only in parent |
|---|
Children
| This class | Descendant classes | Release id | Intersection | Only in this class | Added to child |
|---|---|---|---|---|---|
| NR_4.0_83700.1 | NR_4.0_45016.1 | 6.0 | (1) 3CGP|1|B+3CGP|1|A | (1) 3CGQ|1|B+3CGQ|1|A | (0) |
Heat map of mutual geometric discrepancy, in Angstroms per nucleotide. Instances are ordered to put similar structures near each other. The colorbar ranges from 0 to the maximum observed discrepancy, up to 0.5
#S - ordering by similarity (same as in the heat map).| #S | PDB | Title | Method | Resolution | Length | NAKB_NA_annotation | NAKB_protein_annotation |
|---|---|---|---|---|---|---|---|
| 1 | 3CGP|1|B+3CGP|1|A | Title: X-ray structure of a pseudouridine-containing yeast spliceosomal U2 snRNA-intron branch site duplex bound to iodide ions | X-RAY DIFFRACTION | 1.57 | 13 | ||
| 2 | 3CGQ|1|B+3CGQ|1|A | Title: X-ray structure of a pseudouridine-containing yeast spliceosomal U2 snRNA-intron branch site duplex | X-RAY DIFFRACTION | 2.55 | 13 |
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