Equivalence class NR_4.0_80147.1 Current
| # | IFE | Standardized name | Molecule | Organism | Source | Rfam | Title | Method | Res. Å | Date |
|---|---|---|---|---|---|---|---|---|---|---|
| 1 | 4JRD|1|B (rep) | RNA (5'-R(*AP*AP*AP*AP*AP*AP*AP*AP*AP*AP*A)-3') | Crystal structure of the parallel double-stranded helix of poly(A) RNA | X-ray diffraction | 1 | 2013-06-05 | ||||
| 2 | 4JRD|1|A | RNA (5'-R(*AP*AP*AP*AP*AP*AP*AP*AP*AP*AP*A)-3') | Crystal structure of the parallel double-stranded helix of poly(A) RNA | X-ray diffraction | 1 | 2013-06-05 | ||||
| 3 | 5VXQ|1|B | DNA/RNA (5'-R(*AP*AP*AP*AP*A)-D(P*A)-R(P*AP*AP*AP*AP*A)-3') | synthetic construct | X-Ray crystallography structure of the parallel stranded duplex formed by 5-rA5-dA-rA5 | X-ray diffraction | 1 | 2017-08-16 | |||
| 4 | 5VXQ|1|A | DNA/RNA (5'-R(*AP*AP*AP*AP*A)-D(P*A)-R(P*AP*AP*AP*AP*A)-3') | synthetic construct | X-Ray crystallography structure of the parallel stranded duplex formed by 5-rA5-dA-rA5 | X-ray diffraction | 1 | 2017-08-16 |
Release history
Parents
| This class | Parent classes | Release id | Intersection | Added to this class | Only in parent |
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Children
| This class | Descendant classes | Release id | Intersection | Only in this class | Added to child |
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Heat map of mutual geometric discrepancy, in Angstroms per nucleotide. Instances are ordered to put similar structures near each other. The colorbar ranges from 0 to the maximum observed discrepancy, up to 0.5
#S - ordering by similarity (same as in the heat map).| #S | PDB | Title | Method | Resolution | Length | NAKB_NA_annotation | NAKB_protein_annotation |
|---|---|---|---|---|---|---|---|
| 1 | 5VXQ|1|A | Title: X-Ray crystallography structure of the parallel stranded duplex formed by 5-rA5-dA-rA5 | X-RAY DIFFRACTION | 1 | 10 | ||
| 2 | 4JRD|1|A | Title: Crystal structure of the parallel double-stranded helix of poly(A) RNA | X-RAY DIFFRACTION | 1 | 11 | ||
| 3 | 4JRD|1|B | Title: Crystal structure of the parallel double-stranded helix of poly(A) RNA | X-RAY DIFFRACTION | 1 | 11 | ||
| 4 | 5VXQ|1|B | Title: X-Ray crystallography structure of the parallel stranded duplex formed by 5-rA5-dA-rA5 | X-RAY DIFFRACTION | 1 | 10 |
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