Equivalence class NR_4.0_79992.1 Current
| # | IFE | Standardized name | Molecule | Organism | Source | Rfam | Title | Method | Res. Å | Date |
|---|---|---|---|---|---|---|---|---|---|---|
| 1 | 6DME|1|A (rep) | ppGpp Riboswitch | Sulfobacillus acidophilus | Bacteria | ppGpp Riboswitch bound to ppGpp, thallium acetate structure | X-ray diffraction | 2.7 | 2018-11-14 | ||
| 2 | 6DMC|1|B | ppGpp Riboswitch | Sulfobacillus acidophilus | Bacteria | ppGpp Riboswitch bound to ppGpp, native structure | X-ray diffraction | 2.2 | 2018-11-14 | ||
| 3 | 6DMC|1|A | ppGpp Riboswitch | Sulfobacillus acidophilus | Bacteria | ppGpp Riboswitch bound to ppGpp, native structure | X-ray diffraction | 2.2 | 2018-11-14 | ||
| 4 | 6DMD|1|A | ppGpp Riboswitch | Sulfobacillus acidophilus | Bacteria | ppGpp Riboswitch bound to ppGpp, manganese chloride structure | X-ray diffraction | 2.65 | 2018-11-14 | ||
| 5 | 6DMD|1|B | ppGpp Riboswitch | Sulfobacillus acidophilus | Bacteria | ppGpp Riboswitch bound to ppGpp, manganese chloride structure | X-ray diffraction | 2.65 | 2018-11-14 |
Release history
Parents
| This class | Parent classes | Release id | Intersection | Added to this class | Only in parent |
|---|
Children
| This class | Descendant classes | Release id | Intersection | Only in this class | Added to child |
|---|
Heat map of mutual geometric discrepancy, in Angstroms per nucleotide. Instances are ordered to put similar structures near each other. The colorbar ranges from 0 to the maximum observed discrepancy, up to 0.5
#S - ordering by similarity (same as in the heat map).| #S | PDB | Title | Method | Resolution | Length | NAKB_NA_annotation | NAKB_protein_annotation |
|---|---|---|---|---|---|---|---|
| 1 | 6DMC|1|B | Title: ppGpp Riboswitch bound to ppGpp, native structure | X-RAY DIFFRACTION | 2.2 | 100 | ||
| 2 | 6DMD|1|B | Title: ppGpp Riboswitch bound to ppGpp, manganese chloride structure | X-RAY DIFFRACTION | 2.65 | 100 | ||
| 3 | 6DME|1|A | Title: ppGpp Riboswitch bound to ppGpp, thallium acetate structure | X-RAY DIFFRACTION | 2.7 | 100 | ||
| 4 | 6DMD|1|A | Title: ppGpp Riboswitch bound to ppGpp, manganese chloride structure | X-RAY DIFFRACTION | 2.65 | 100 | ||
| 5 | 6DMC|1|A | Title: ppGpp Riboswitch bound to ppGpp, native structure | X-RAY DIFFRACTION | 2.2 | 100 |
Coloring options: