Equivalence class NR_4.0_77951.1 Obsolete
| # | IFE | Standardized name | Molecule | Organism | Source | Rfam | Title | Method | Res. Å | Date |
|---|---|---|---|---|---|---|---|---|---|---|
| 1 | 4NLF|1|A (rep) | 23S ribosomal RNA Sarcin Ricin Loop | 2'-trifluoromethylthio-2'-deoxycytidine-modified SRL | X-ray diffraction | 1 | 2014-11-19 | ||||
| 2 | 4Y27|1|A | 27-mer SRL RNA | Escherichia coli | Bacteria | E.coli 23S Sarcin-Ricil Loop, modified with a 2-Me on G2661 and a methylphosphonate on A2662 | X-ray diffraction | 1 | 2015-11-18 |
Release history
| Release | 6.0 |
|---|---|
| Date | 2017-04-04 |
Parents
| This class | Parent classes | Release id | Intersection | Added to this class | Only in parent |
|---|---|---|---|---|---|
| NR_4.0_77951.1 | NR_4.0_20132.2 | 6.0 | (1) 4NLF|1|A | (1) 4Y27|1|A | (14) 3DW7|1|A, 1Q9A|1|A, 483D|1|A, 3DW6|1|A, 1MSY|1|A, 480D|1|A, 3DW5|1|A, 5D99|1|A, 3S8U|1|A, 3DW4|1|A, 4NXH|1|A, 3S7C|1|A, 3DVZ|1|A, 4NMG|1|A |
| NR_4.0_77951.1 | NR_4.0_78940.1 | 6.0 | (1) 4Y27|1|A | (1) 4NLF|1|A | (0) |
Heat map of mutual geometric discrepancy, in Angstroms per nucleotide. Instances are ordered to put similar structures near each other. The colorbar ranges from 0 to the maximum observed discrepancy, up to 0.5
#S - ordering by similarity (same as in the heat map).| #S | PDB | Title | Method | Resolution | Length | NAKB_NA_annotation | NAKB_protein_annotation |
|---|---|---|---|---|---|---|---|
| 1 | 4NLF|1|A | Title: 2'-trifluoromethylthio-2'-deoxycytidine-modified SRL | X-RAY DIFFRACTION | 1 | 28 | ||
| 2 | 4Y27|1|A | Title: E.coli 23S Sarcin-Ricil Loop, modified with a 2-Me on G2661 and a methylphosphonate on A2662 | X-RAY DIFFRACTION | 1 | 25 |
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