Equivalence class NR_4.0_75860.2 Obsolete
| # | IFE | Standardized name | Molecule | Organism | Source | Rfam | Title | Method | Res. Å | Date |
|---|---|---|---|---|---|---|---|---|---|---|
| 1 | 1UTD|1|0 (rep) | 5'-R(*GP*UP*UP*UP*GP*AP)-3' | The structure of the trp RNA-binding attenuation protein (TRAP) bound to a 63-nucleotide RNA molecule containing GAGUUU repeats | X-ray diffraction | 2.1 | 2004-01-15 | ||||
| 2 | 1UTD|1|2 | 5'-R(*GP*UP*UP*UP*GP*AP)-3' | The structure of the trp RNA-binding attenuation protein (TRAP) bound to a 63-nucleotide RNA molecule containing GAGUUU repeats | X-ray diffraction | 2.1 | 2004-01-15 | ||||
| 3 | 1UTD|1|3 | 5'-R(*GP*UP*UP*UP*GP*AP)-3' | The structure of the trp RNA-binding attenuation protein (TRAP) bound to a 63-nucleotide RNA molecule containing GAGUUU repeats | X-ray diffraction | 2.1 | 2004-01-15 | ||||
| 4 | 1UTD|1|4 | 5'-R(*GP*UP*UP*UP*GP*AP)-3' | The structure of the trp RNA-binding attenuation protein (TRAP) bound to a 63-nucleotide RNA molecule containing GAGUUU repeats | X-ray diffraction | 2.1 | 2004-01-15 | ||||
| 5 | 1UTD|1|5 | 5'-R(*GP*UP*UP*UP*GP*AP)-3' | The structure of the trp RNA-binding attenuation protein (TRAP) bound to a 63-nucleotide RNA molecule containing GAGUUU repeats | X-ray diffraction | 2.1 | 2004-01-15 | ||||
| 6 | 1UTD|1|6 | 5'-R(*GP*UP*UP*UP*GP*AP)-3' | The structure of the trp RNA-binding attenuation protein (TRAP) bound to a 63-nucleotide RNA molecule containing GAGUUU repeats | X-ray diffraction | 2.1 | 2004-01-15 | ||||
| 7 | 1UTD|1|7 | 5'-R(*GP*UP*UP*UP*GP*AP)-3' | The structure of the trp RNA-binding attenuation protein (TRAP) bound to a 63-nucleotide RNA molecule containing GAGUUU repeats | X-ray diffraction | 2.1 | 2004-01-15 | ||||
| 8 | 1UTD|1|8 | 5'-R(*GP*UP*UP*UP*GP*AP)-3' | The structure of the trp RNA-binding attenuation protein (TRAP) bound to a 63-nucleotide RNA molecule containing GAGUUU repeats | X-ray diffraction | 2.1 | 2004-01-15 | ||||
| 9 | 1UTD|1|9 | 5'-R(*GP*UP*UP*UP*GP*AP)-3' | The structure of the trp RNA-binding attenuation protein (TRAP) bound to a 63-nucleotide RNA molecule containing GAGUUU repeats | X-ray diffraction | 2.1 | 2004-01-15 | ||||
| 10 | 1UTD|1|Z | 5'-R(*GP*UP*UP*UP*GP*AP)-3' | The structure of the trp RNA-binding attenuation protein (TRAP) bound to a 63-nucleotide RNA molecule containing GAGUUU repeats | X-ray diffraction | 2.1 | 2004-01-15 | ||||
| 11 | 1UTD|1|1 | 5'-R(*GP*UP*UP*UP*GP*AP)-3' | The structure of the trp RNA-binding attenuation protein (TRAP) bound to a 63-nucleotide RNA molecule containing GAGUUU repeats | X-ray diffraction | 2.1 | 2004-01-15 |
Release history
| Release | 4.0 |
|---|---|
| Date | 2016-07-25 |
Parents
| This class | Parent classes | Release id | Intersection | Added to this class | Only in parent |
|---|---|---|---|---|---|
| NR_4.0_75860.2 | NR_all_08769.1 | 4.0 | (1) 1UTD|1|1 | (10) 1UTD|1|3, 1UTD|1|2, 1UTD|1|0, 1UTD|1|Z, 1UTD|1|9, 1UTD|1|8, 1UTD|1|7, 1UTD|1|6, 1UTD|1|5, 1UTD|1|4 | (0) |
| NR_4.0_75860.2 | NR_all_75860.1 | 4.0 | (10) 1UTD|1|Z, 1UTD|1|9, 1UTD|1|8, 1UTD|1|7, 1UTD|1|6, 1UTD|1|5, 1UTD|1|4, 1UTD|1|3, 1UTD|1|2, 1UTD|1|0 | (1) 1UTD|1|1 | (0) |
Children
| This class | Descendant classes | Release id | Intersection | Only in this class | Added to child |
|---|
Heat map of mutual geometric discrepancy, in Angstroms per nucleotide. Instances are ordered to put similar structures near each other. The colorbar ranges from 0 to the maximum observed discrepancy, up to 0.5
#S - ordering by similarity (same as in the heat map).| #S | PDB | Title | Method | Resolution | Length | NAKB_NA_annotation | NAKB_protein_annotation |
|---|---|---|---|---|---|---|---|
| 1 | 1UTD|1|8 | Title: The structure of the trp RNA-binding attenuation protein (TRAP) bound to a 63-nucleotide RNA molecule containing GAGUUU repeats | X-RAY DIFFRACTION | 2.1 | 4 | ||
| 2 | 1UTD|1|0 | Title: The structure of the trp RNA-binding attenuation protein (TRAP) bound to a 63-nucleotide RNA molecule containing GAGUUU repeats | X-RAY DIFFRACTION | 2.1 | 6 | ||
| 3 | 1UTD|1|5 | Title: The structure of the trp RNA-binding attenuation protein (TRAP) bound to a 63-nucleotide RNA molecule containing GAGUUU repeats | X-RAY DIFFRACTION | 2.1 | 4 | ||
| 4 | 1UTD|1|9 | Title: The structure of the trp RNA-binding attenuation protein (TRAP) bound to a 63-nucleotide RNA molecule containing GAGUUU repeats | X-RAY DIFFRACTION | 2.1 | 4 | ||
| 5 | 1UTD|1|6 | Title: The structure of the trp RNA-binding attenuation protein (TRAP) bound to a 63-nucleotide RNA molecule containing GAGUUU repeats | X-RAY DIFFRACTION | 2.1 | 4 | ||
| 6 | 1UTD|1|7 | Title: The structure of the trp RNA-binding attenuation protein (TRAP) bound to a 63-nucleotide RNA molecule containing GAGUUU repeats | X-RAY DIFFRACTION | 2.1 | 4 | ||
| 7 | 1UTD|1|4 | Title: The structure of the trp RNA-binding attenuation protein (TRAP) bound to a 63-nucleotide RNA molecule containing GAGUUU repeats | X-RAY DIFFRACTION | 2.1 | 4 | ||
| 8 | 1UTD|1|Z | Title: The structure of the trp RNA-binding attenuation protein (TRAP) bound to a 63-nucleotide RNA molecule containing GAGUUU repeats | X-RAY DIFFRACTION | 2.1 | 4 | ||
| 9 | 1UTD|1|3 | Title: The structure of the trp RNA-binding attenuation protein (TRAP) bound to a 63-nucleotide RNA molecule containing GAGUUU repeats | X-RAY DIFFRACTION | 2.1 | 4 | ||
| 10 | 1UTD|1|2 | Title: The structure of the trp RNA-binding attenuation protein (TRAP) bound to a 63-nucleotide RNA molecule containing GAGUUU repeats | X-RAY DIFFRACTION | 2.1 | 4 | ||
| 11 | 1UTD|1|1 | Title: The structure of the trp RNA-binding attenuation protein (TRAP) bound to a 63-nucleotide RNA molecule containing GAGUUU repeats | X-RAY DIFFRACTION | 2.1 | 3 |
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