Equivalence class NR_4.0_75740.1 Obsolete
| # | IFE | Standardized name | Molecule | Organism | Source | Rfam | Title | Method | Res. Å | Date |
|---|---|---|---|---|---|---|---|---|---|---|
| 1 | 5GAP|1|W (rep) | U6 spliceosomal RNA | U6 snRNA | Saccharomyces cerevisiae | Eukarya | RF00026 | Body region of the U4/U6.U5 tri-snRNP | Electron microscopy | 3.6 | 2016-01-27 |
| 2 | 3JCM|1|D | U6 spliceosomal RNA | SNR6 snRNA | Saccharomyces cerevisiae | Eukarya | RF00026 | Cryo-EM structure of the spliceosomal U4/U6.U5 tri-snRNP | Electron microscopy | 3.8 | 2016-02-24 |
Release history
| Release | 4.0 |
|---|---|
| Date | 2016-07-25 |
Parents
| This class | Parent classes | Release id | Intersection | Added to this class | Only in parent |
|---|---|---|---|---|---|
| NR_4.0_75740.1 | NR_all_81926.1 | 4.0 | (1) 3JCM|1|D | (1) 5GAP|1|W | (0) |
| NR_4.0_75740.1 | NR_all_99256.1 | 4.0 | (1) 5GAP|1|W | (1) 3JCM|1|D | (0) |
Children
| This class | Descendant classes | Release id | Intersection | Only in this class | Added to child |
|---|
Heat map of mutual geometric discrepancy, in Angstroms per nucleotide. Instances are ordered to put similar structures near each other. The colorbar ranges from 0 to the maximum observed discrepancy, up to 0.5
#S - ordering by similarity (same as in the heat map).| #S | PDB | Title | Method | Resolution | Length | NAKB_NA_annotation | NAKB_protein_annotation |
|---|---|---|---|---|---|---|---|
| 1 | 5GAP|1|W | Title: Body region of the U4/U6.U5 tri-snRNP | ELECTRON MICROSCOPY | 3.6 | 56 | ||
| 2 | 3JCM|1|D | Title: Cryo-EM structure of the spliceosomal U4/U6.U5 tri-snRNP | ELECTRON MICROSCOPY | 3.8 | 45 |
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