Equivalence class NR_4.0_75211.1 Obsolete
# | IFE | Standardized name | Molecule | Organism | Source | Rfam | Title | Method | Res. Å | Date |
---|---|---|---|---|---|---|---|---|---|---|
1 | 3PEY|1|B (rep) | RNA (5'-R(P*UP*UP*UP*UP*UP*U)-3') | S. cerevisiae Dbp5 bound to RNA and ADP BeF3 | X-ray diffraction | 1.4 | 2011-03-23 | ||||
2 | 3PEW|1|B | RNA (5'-R(P*UP*UP*UP*UP*UP*U)-3') | S. cerevisiae Dbp5 L327V bound to RNA and ADP BeF3 | X-ray diffraction | 1.5 | 2011-03-23 | ||||
3 | 2HYI|1|F | 5'-R(*UP*UP*UP*UP*UP*U)-3' | Structure of the human exon junction complex with a trapped DEAD-box helicase bound to RNA | X-ray diffraction | 2.3 | 2006-08-15 | ||||
4 | 3EX7|1|F | RNA (5'-R(*UP*UP*UP*UP*UP*U)-3') | The crystal structure of EJC in its transition state | X-ray diffraction | 2.3 | 2008-12-09 | ||||
5 | 3EX7|1|J | RNA (5'-R(*UP*UP*UP*UP*UP*U)-3') | The crystal structure of EJC in its transition state | X-ray diffraction | 2.3 | 2008-12-09 | ||||
6 | 2HYI|1|L | 5'-R(*UP*UP*UP*UP*UP*U)-3' | Structure of the human exon junction complex with a trapped DEAD-box helicase bound to RNA | X-ray diffraction | 2.3 | 2006-08-15 |
Release history
Release | 2.0 |
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Date | 2014-12-05 |
Parents
This class | Parent classes | Release id | Intersection | Added to this class | Only in parent |
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Children
This class | Descendant classes | Release id | Intersection | Only in this class | Added to child |
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Heat map of mutual geometric discrepancy, in Angstroms per nucleotide. Instances are ordered to put similar structures near each other. The colorbar ranges from 0 to the maximum observed discrepancy, up to 0.5
#S - ordering by similarity (same as in the heat map).#S | PDB | Title | Method | Resolution | Length | NAKB_NA_annotation | NAKB_protein_annotation |
---|---|---|---|---|---|---|---|
1 | 2HYI|1|L | Title: Structure of the human exon junction complex with a trapped DEAD-box helicase bound to RNA | X-RAY DIFFRACTION | 2.3 | 6 | ||
2 | 2HYI|1|F | Title: Structure of the human exon junction complex with a trapped DEAD-box helicase bound to RNA | X-RAY DIFFRACTION | 2.3 | 6 | ||
3 | 3EX7|1|J | Title: The crystal structure of EJC in its transition state | X-RAY DIFFRACTION | 2.3 | 6 | ||
4 | 3EX7|1|F | Title: The crystal structure of EJC in its transition state | X-RAY DIFFRACTION | 2.3 | 6 | ||
5 | 3PEY|1|B | Title: S. cerevisiae Dbp5 bound to RNA and ADP BeF3 | X-RAY DIFFRACTION | 1.4 | 6 | ||
6 | 3PEW|1|B | Title: S. cerevisiae Dbp5 L327V bound to RNA and ADP BeF3 | X-RAY DIFFRACTION | 1.5 | 6 |
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