Equivalence class NR_4.0_74141.1 Obsolete
| # | IFE | Standardized name | Molecule | Organism | Source | Rfam | Title | Method | Res. Å | Date |
|---|---|---|---|---|---|---|---|---|---|---|
| 1 | 1PJO|1|A (rep) | 5'-R(*CP*AP*AP*AP*GP*AP*AP*AP*AP*G)-3' | Crystal Structure of an RNA/DNA hybrid of HIV-1 PPT | X-ray diffraction | 1.1 | 2003-12-09 | ||||
| 2 | 1PJG|1|A | 5'-R(*CP*AP*AP*AP*GP*AP*AP*AP*AP*G)-3' | RNA/DNA Hybrid Decamer of CAAAGAAAAG/CTTTTCTTTG | X-ray diffraction | 1.15 | 2003-12-09 | ||||
| 3 | 1G4Q|1|A | 5'-R(*CP*AP*AP*AP*GP*AP*AP*AP*AP*G)-3' | RNA/DNA HYBRID DECAMER OF CAAAGAAAAG/CTTTTCTTTG | X-ray diffraction | 1.15 | 2003-07-08 | ||||
| 4 | 1JB8|1|A | 5'-R(*CP*AP*AP*AP*GP*AP*AP*AP*AP*G)-3' | The Crystal Structure of an RNA/DNA Hybrid Reveals Novel Intermolecular Intercalation | X-ray diffraction | 2.38 | 2003-07-01 |
Parents
| This class | Parent classes | Release id | Intersection | Added to this class | Only in parent |
|---|
Heat map of mutual geometric discrepancy, in Angstroms per nucleotide. Instances are ordered to put similar structures near each other. The colorbar ranges from 0 to the maximum observed discrepancy, up to 0.5
#S - ordering by similarity (same as in the heat map).| #S | PDB | Title | Method | Resolution | Length | NAKB_NA_annotation | NAKB_protein_annotation |
|---|---|---|---|---|---|---|---|
| 1 | 1PJO|1|A | Title: Crystal Structure of an RNA/DNA hybrid of HIV-1 PPT | X-RAY DIFFRACTION | 1.1 | 10 | ||
| 2 | 1G4Q|1|A | Title: RNA/DNA HYBRID DECAMER OF CAAAGAAAAG/CTTTTCTTTG | X-RAY DIFFRACTION | 1.15 | 10 | ||
| 3 | 1PJG|1|A | Title: RNA/DNA Hybrid Decamer of CAAAGAAAAG/CTTTTCTTTG | X-RAY DIFFRACTION | 1.15 | 10 | ||
| 4 | 1JB8|1|A | Title: The Crystal Structure of an RNA/DNA Hybrid Reveals Novel Intermolecular Intercalation | X-RAY DIFFRACTION | 2.38 | 10 |
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