Equivalence class NR_4.0_73901.1 Obsolete
| # | IFE | Standardized name | Molecule | Organism | Source | Rfam | Title | Method | Res. Å | Date |
|---|---|---|---|---|---|---|---|---|---|---|
| 1 | 4RKV|1|B (rep) | RNA (5'-R(*UP*GP*GP*GP*GP*U)-3') | synthetic construct | Synthetic | Structural variations and solvent structure of UGGGGU quadruplexes stabilized by Sr2+ ions | X-ray diffraction | 0.88 | 2014-11-19 | ||
| 2 | 1J8G|1|B | 5'-R(*UP*GP*GP*GP*GP*U)-3' | X-ray Analysis of a RNA Tetraplex r(uggggu)4 at Ultra-High Resolution | X-ray diffraction | 0.61 | 2001-11-23 |
Release history
Parents
| This class | Parent classes | Release id | Intersection | Added to this class | Only in parent |
|---|---|---|---|---|---|
| NR_4.0_73901.1 | NR_all_97835.1 | 5.0 | (2) 1J8G|1|B, 4RKV|1|B | (0) | (20) 4RNE|1|A, 1RAU|1|C, 4RNE|1|H, 1J8G|1|A, 4RNE|1|C, 4RJ1|1|A, 1J8G|1|D, 4XK0|1|C, 4RNE|1|E, 4RKV|1|A, 1RAU|1|B, 4RNE|1|G, 4RNE|1|B, 1RAU|1|D, 1J8G|1|C, 4XK0|1|A, 4RNE|1|D, 4RJ1|1|B, 1RAU|1|A, 4RNE|1|F |
Heat map of mutual geometric discrepancy, in Angstroms per nucleotide. Instances are ordered to put similar structures near each other. The colorbar ranges from 0 to the maximum observed discrepancy, up to 0.5
#S - ordering by similarity (same as in the heat map).| #S | PDB | Title | Method | Resolution | Length | NAKB_NA_annotation | NAKB_protein_annotation |
|---|---|---|---|---|---|---|---|
| 1 | 4RKV|1|B | Title: Structural variations and solvent structure of UGGGGU quadruplexes stabilized by Sr2+ ions | X-RAY DIFFRACTION | 0.88 | 6 | ||
| 2 | 1J8G|1|B | Title: X-ray Analysis of a RNA Tetraplex r(uggggu)4 at Ultra-High Resolution | X-RAY DIFFRACTION | 0.61 | 6 |
Coloring options: