Equivalence class NR_4.0_73771.1 Obsolete
| # | IFE | Standardized name | Molecule | Organism | Source | Rfam | Title | Method | Res. Å | Date |
|---|---|---|---|---|---|---|---|---|---|---|
| 1 | 3B31|1|A (rep) | RNA (29-MER), RNA (5'-R(P*UP*AP*AP*GP*AP*AP*AP*UP*UP*UP*AP*CP*CP*U)-3') | Crystal structure of domain III of the Cricket Paralysis Virus IRES RNA | X-ray diffraction | 2.4 | 2007-12-25 | ||||
| 2 | 3MJA|1|B | Internal ribosome entry site | Domain 3 of the cricket paralysis virus intergenic region IRES RNA, RNA (5'-R(P*UP*AP*AP*GP*AP*AP*AP*UP*UP*UP*AP*CP*CP*U)-3') | Cricket Paralysis Virus IGR IRES Domain 3 RNA bound to selenate, structure #2 | X-ray diffraction | 2.8 | 2010-05-19 | |||
| 3 | 3MJB|1|A | Internal ribosome entry site | Domain 3 of the cricket paralysis virus intergenic region IRES RNA, RNA (5'-R(P*UP*AP*AP*GP*AP*AP*AP*UP*UP*UP*AP*CP*CP*U)-3') | Cricket Paralysis Virus IGR IRES Domain 3 RNA bound to sulfate | X-ray diffraction | 2.8 | 2010-05-19 | |||
| 4 | 3MJ3|1|B | Internal ribosome entry site | Domain 3 of the cricket paralysis virus intergenic region IRES RNA, RNA (5'-R(P*UP*AP*AP*GP*AP*AP*AP*UP*UP*UP*AP*CP*CP*U)-3') | Cricket Paralysis Virus IGR IRES Domain 3 RNA bound to selenate | X-ray diffraction | 3.1 | 2010-05-19 |
Parents
| This class | Parent classes | Release id | Intersection | Added to this class | Only in parent |
|---|
Heat map of mutual geometric discrepancy, in Angstroms per nucleotide. Instances are ordered to put similar structures near each other. The colorbar ranges from 0 to the maximum observed discrepancy, up to 0.5
#S - ordering by similarity (same as in the heat map).| #S | PDB | Title | Method | Resolution | Length | NAKB_NA_annotation | NAKB_protein_annotation |
|---|---|---|---|---|---|---|---|
| 1 | 3MJ3|1|B | Title: Cricket Paralysis Virus IGR IRES Domain 3 RNA bound to selenate | X-RAY DIFFRACTION | 3.1 | 29 | ||
| 2 | 3MJA|1|B | Title: Cricket Paralysis Virus IGR IRES Domain 3 RNA bound to selenate, structure #2 | X-RAY DIFFRACTION | 2.8 | 29 | ||
| 3 | 3MJB|1|A | Title: Cricket Paralysis Virus IGR IRES Domain 3 RNA bound to sulfate | X-RAY DIFFRACTION | 2.8 | 29 | ||
| 4 | 3B31|1|A | Title: Crystal structure of domain III of the Cricket Paralysis Virus IRES RNA | X-RAY DIFFRACTION | 2.4 | 29 |
Coloring options: