Equivalence class NR_4.0_70443.1 Obsolete
| # | IFE | Standardized name | Molecule | Organism | Source | Rfam | Title | Method | Res. Å | Date |
|---|---|---|---|---|---|---|---|---|---|---|
| 1 | 3PDR|1|A (rep) | M-box riboswitch (ykoK leader) | M-box Riboswitch RNA | Bacillus subtilis | Bacteria | RF00380 | Crystal structure of manganese bound M-box RNA | X-ray diffraction | 1.85 | 2011-02-23 |
| 2 | 2QBZ|1|X | M-box riboswitch (ykoK leader) | M-Box RNA, ykoK riboswitch aptamer | RF00380 | Structure of the M-Box Riboswitch Aptamer Domain | X-ray diffraction | 2.6 | 2007-09-18 | ||
| 3 | 3PDR|1|X | M-box riboswitch (ykoK leader) | M-box Riboswitch RNA | Bacillus subtilis | Bacteria | RF00380 | Crystal structure of manganese bound M-box RNA | X-ray diffraction | 1.85 | 2011-02-23 |
Parents
| This class | Parent classes | Release id | Intersection | Added to this class | Only in parent |
|---|
Children
| This class | Descendant classes | Release id | Intersection | Only in this class | Added to child |
|---|---|---|---|---|---|
| NR_4.0_70443.1 | NR_4.0_70443.2 | 6.0 | (2) 3PDR|1|A, 3PDR|1|X | (1) 2QBZ|1|X | (0) |
Heat map of mutual geometric discrepancy, in Angstroms per nucleotide. Instances are ordered to put similar structures near each other. The colorbar ranges from 0 to the maximum observed discrepancy, up to 0.5
#S - ordering by similarity (same as in the heat map).| #S | PDB | Title | Method | Resolution | Length | NAKB_NA_annotation | NAKB_protein_annotation |
|---|---|---|---|---|---|---|---|
| 1 | 3PDR|1|A | Title: Crystal structure of manganese bound M-box RNA | X-RAY DIFFRACTION | 1.85 | 161 | ||
| 2 | 2QBZ|1|X | Title: Structure of the M-Box Riboswitch Aptamer Domain | X-RAY DIFFRACTION | 2.6 | 153 | ||
| 3 | 3PDR|1|X | Title: Crystal structure of manganese bound M-box RNA | X-RAY DIFFRACTION | 1.85 | 161 |
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