Equivalence class NR_4.0_70248.3 Obsolete
| # | IFE | Standardized name | Molecule | Organism | Source | Rfam | Title | Method | Res. Å | Date |
|---|---|---|---|---|---|---|---|---|---|---|
| 1 | 4JNX|1|B+ 4JNX|1|G (rep) | 5'-R(P*GP*CP*UP*GP*CP*UP*GP*CP*UP*GP*CP*UP*GP*CP*UP*GP*CP*UP*GP*C)-3' | Crystal structure of RNA silencing suppressor p19 complexed with double-helical RNA 20mer pG(CUG)6C | X-ray diffraction | 1.95 | 2014-03-19 | ||||
| 2 | 4E48|1|A+ 4E48|1|B | 5'-R(P*GP*CP*UP*GP*CP*UP*GP*CP*UP*GP*CP*UP*GP*CP*UP*GP*CP*UP*GP*C)-3' | Structure of 20mer double-helical RNA composed of CUG/CUG-repeats | X-ray diffraction | 2.5 | 2012-07-11 | ||||
| 3 | 4E48|1|D | 5'-R(P*GP*CP*UP*GP*CP*UP*GP*CP*UP*GP*CP*UP*GP*CP*UP*GP*CP*UP*GP*C)-3' | Structure of 20mer double-helical RNA composed of CUG/CUG-repeats | X-ray diffraction | 2.5 | 2012-07-11 |
Release history
| Release | 5.0 |
|---|---|
| Date | 2016-07-25 |
Parents
| This class | Parent classes | Release id | Intersection | Added to this class | Only in parent |
|---|---|---|---|---|---|
| NR_4.0_70248.3 | NR_all_70248.2 | 5.0 | (3) 4E48|1|A+4E48|1|B, 4JNX|1|B+4JNX|1|G, 4E48|1|D | (0) | (1) 4JGN|1|E |
Children
| This class | Descendant classes | Release id | Intersection | Only in this class | Added to child |
|---|---|---|---|---|---|
| NR_4.0_70248.3 | NR_4.0_03657.1 | 6.0 | (1) 4JNX|1|B+4JNX|1|G | (2) 4E48|1|A+4E48|1|B, 4E48|1|D | (0) |
Heat map of mutual geometric discrepancy, in Angstroms per nucleotide. Instances are ordered to put similar structures near each other. The colorbar ranges from 0 to the maximum observed discrepancy, up to 0.5
#S - ordering by similarity (same as in the heat map).| #S | PDB | Title | Method | Resolution | Length | NAKB_NA_annotation | NAKB_protein_annotation |
|---|---|---|---|---|---|---|---|
| 1 | 4E48|1|D | Title: Structure of 20mer double-helical RNA composed of CUG/CUG-repeats | X-RAY DIFFRACTION | 2.5 | 20 | ||
| 2 | 4E48|1|A+4E48|1|B | Title: Structure of 20mer double-helical RNA composed of CUG/CUG-repeats | X-RAY DIFFRACTION | 2.5 | 20 | ||
| 3 | 4JNX|1|B+4JNX|1|G | Title: Crystal structure of RNA silencing suppressor p19 complexed with double-helical RNA 20mer pG(CUG)6C | X-RAY DIFFRACTION | 1.95 | 39 |
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