Equivalence class NR_4.0_66825.1 Obsolete
| # | IFE | Standardized name | Molecule | Organism | Source | Rfam | Title | Method | Res. Å | Date |
|---|---|---|---|---|---|---|---|---|---|---|
| 1 | 5O60|1|A (rep) | Large subunit ribosomal RNA | 23S rRNA, tRNA CCA-end acetylated (Phe) | Mycolicibacterium smegmatis | Bacteria | RF02541 | Structure of the 50S large ribosomal subunit from Mycobacterium smegmatis | Electron microscopy | 3.18 | 2017-07-12 |
| 2 | 5O61|1|A | Large subunit ribosomal RNA | 23S rRNA | Mycolicibacterium smegmatis | Bacteria | RF02541 | The complete structure of the Mycobacterium smegmatis 70S ribosome | Electron microscopy | 3.31 | 2017-07-12 |
| 3 | 5ZET|1|A | Large subunit ribosomal RNA | 23S rRNA | Mycolicibacterium smegmatis | Bacteria | RF02541 | M. smegmatis P/P state 50S ribosomal subunit | Electron microscopy | 3.2 | 2018-09-26 |
| 4 | 6DZP|1|A | Large subunit ribosomal RNA | 23S rRNA | Mycolicibacterium smegmatis | Bacteria | RF02541 | Cryo-EM Structure of Mycobacterium smegmatis C(minus) 50S ribosomal subunit | Electron microscopy | 3.42 | 2018-10-03 |
| 5 | 6DZI|1|A | Large subunit ribosomal RNA | 23 S rRNA (3119-MER) | Mycolicibacterium smegmatis | Bacteria | RF02541 | Cryo-EM Structure of Mycobacterium smegmatis 70S C(minus) ribosome 70S-MPY complex | Electron microscopy | 3.46 | 2018-09-26 |
| 6 | 5ZEB|1|A | Large subunit ribosomal RNA | 23S rRNA | Mycolicibacterium smegmatis | Bacteria | RF02541 | M. Smegmatis P/P state 70S ribosome structure | Electron microscopy | 3.4 | 2018-09-26 |
| 7 | 5XYM|1|A | Large subunit ribosomal RNA | 23S RNA | Mycolicibacterium smegmatis | Bacteria | RF02541 | Large subunit of Mycobacterium smegmatis | Electron microscopy | 3.08 | 2017-09-27 |
| 8 | 5ZEP|1|A | Large subunit ribosomal RNA | 23S rRNA | Mycolicibacterium smegmatis | Bacteria | RF02541 | M. smegmatis hibernating state 70S ribosome structure | Electron microscopy | 3.4 | 2018-09-26 |
Heat map of mutual geometric discrepancy, in Angstroms per nucleotide. Instances are ordered to put similar structures near each other. The colorbar ranges from 0 to the maximum observed discrepancy, up to 0.5
#S - ordering by similarity (same as in the heat map).| #S | PDB | Title | Method | Resolution | Length | NAKB_NA_annotation | NAKB_protein_annotation |
|---|---|---|---|---|---|---|---|
| 1 | 5XYM|1|A | Title: Large subunit of Mycobacterium smegmatis | ELECTRON MICROSCOPY | 3.08 | 2665 | ||
| 2 | 6DZP|1|A | Title: Cryo-EM Structure of Mycobacterium smegmatis C(minus) 50S ribosomal subunit | ELECTRON MICROSCOPY | 3.42 | 3119 | ||
| 3 | 6DZI|1|A | Title: Cryo-EM Structure of Mycobacterium smegmatis 70S C(minus) ribosome 70S-MPY complex | ELECTRON MICROSCOPY | 3.46 | 3119 | ||
| 4 | 5O61|1|A | Title: The complete structure of the Mycobacterium smegmatis 70S ribosome | ELECTRON MICROSCOPY | 3.31 | 3119 | ||
| 5 | 5O60|1|A | Title: Structure of the 50S large ribosomal subunit from Mycobacterium smegmatis | ELECTRON MICROSCOPY | 3.18 | 3119 | ||
| 6 | 5ZEB|1|A | Title: M. Smegmatis P/P state 70S ribosome structure | ELECTRON MICROSCOPY | 3.4 | 3102 | ||
| 7 | 5ZET|1|A | Title: M. smegmatis P/P state 50S ribosomal subunit | ELECTRON MICROSCOPY | 3.2 | 3102 | ||
| 8 | 5ZEP|1|A | Title: M. smegmatis hibernating state 70S ribosome structure | ELECTRON MICROSCOPY | 3.4 | 3102 |
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