Equivalence class NR_4.0_65927.1 Current
| # | IFE | Standardized name | Molecule | Organism | Source | Rfam | Title | Method | Res. Å | Date |
|---|---|---|---|---|---|---|---|---|---|---|
| 1 | 5T3K|1|A+ 5T3K|1|B (rep) | RNA (5'-R(*GP*GP*UP*GP*GP*UP*GP*AP*AP*GP*UP*CP*GP*CP*UP*GP*G)-3'), RNA (5'-R(*CP*AP*GP*CP*GP*(75B)P*CP*AP*CP*AP*CP*CP*AP*CP*CP*C)-3') | synthetic construct | Synthetic | Fluorescence detection of RNA-ligand binding and crystal structure determination of ribosomal decoding site RNA using a heavy atom containing fluorescent ribonucleoside | X-ray diffraction | 2.14 | 2017-07-05 | ||
| 2 | 5T3K|1|C+ 5T3K|1|D | RNA (5'-R(*GP*GP*UP*GP*GP*UP*GP*AP*AP*GP*UP*CP*GP*CP*UP*GP*G)-3'), RNA (5'-R(*CP*AP*GP*CP*GP*(75B)P*CP*AP*CP*AP*CP*CP*AP*CP*CP*C)-3') | synthetic construct | Synthetic | Fluorescence detection of RNA-ligand binding and crystal structure determination of ribosomal decoding site RNA using a heavy atom containing fluorescent ribonucleoside | X-ray diffraction | 2.14 | 2017-07-05 | ||
| 3 | 1T0D|1|C+ 1T0D|1|D | 5'-R(*GP*GP*UP*GP*GP*UP*GP*(MTU)P*AP*GP*UP*CP*GP*CP*UP*GP*G)-3', 5'-R(*CP*AP*GP*CP*GP*UP*CP*AP*CP*AP*CP*CP*AP*CP*CP*C)-3' | Crystal Structure of 2-aminopurine labelled bacterial decoding site RNA | X-ray diffraction | 2.2 | 2004-06-15 | ||||
| 4 | 1T0D|1|A+ 1T0D|1|B | 5'-R(*GP*GP*UP*GP*GP*UP*GP*(MTU)P*AP*GP*UP*CP*GP*CP*UP*GP*G)-3', 5'-R(*CP*AP*GP*CP*GP*UP*CP*AP*CP*AP*CP*CP*AP*CP*CP*C)-3' | Crystal Structure of 2-aminopurine labelled bacterial decoding site RNA | X-ray diffraction | 2.2 | 2004-06-15 |
Release history
Parents
| This class | Parent classes | Release id | Intersection | Added to this class | Only in parent |
|---|
Children
| This class | Descendant classes | Release id | Intersection | Only in this class | Added to child |
|---|
Heat map of mutual geometric discrepancy, in Angstroms per nucleotide. Instances are ordered to put similar structures near each other. The colorbar ranges from 0 to the maximum observed discrepancy, up to 0.5
#S - ordering by similarity (same as in the heat map).| #S | PDB | Title | Method | Resolution | Length | NAKB_NA_annotation | NAKB_protein_annotation |
|---|---|---|---|---|---|---|---|
| 1 | 5T3K|1|C+5T3K|1|D | Title: Fluorescence detection of RNA-ligand binding and crystal structure determination of ribosomal decoding site RNA using a heavy atom containing fluorescent ribonucleoside | X-RAY DIFFRACTION | 2.14 | 17 | ||
| 2 | 1T0D|1|C+1T0D|1|D | Title: Crystal Structure of 2-aminopurine labelled bacterial decoding site RNA | X-RAY DIFFRACTION | 2.2 | 16 | ||
| 3 | 1T0D|1|A+1T0D|1|B | Title: Crystal Structure of 2-aminopurine labelled bacterial decoding site RNA | X-RAY DIFFRACTION | 2.2 | 16 | ||
| 4 | 5T3K|1|A+5T3K|1|B | Title: Fluorescence detection of RNA-ligand binding and crystal structure determination of ribosomal decoding site RNA using a heavy atom containing fluorescent ribonucleoside | X-RAY DIFFRACTION | 2.14 | 17 |
Coloring options: