Equivalence class NR_4.0_65570.1 Obsolete
| # | IFE | Standardized name | Molecule | Organism | Source | Rfam | Title | Method | Res. Å | Date |
|---|---|---|---|---|---|---|---|---|---|---|
| 1 | 3J92|1|5+ 3J92|1|8 (rep) | Large subunit ribosomal RNA + 5.8S ribosomal RNA | 28S rRNA, 5.8S rRNA | Oryctolagus cuniculus | Eukarya | RF02543 + RF00002 | Structure and assembly pathway of the ribosome quality control complex | Electron microscopy | 3.6 | 2015-01-21 |
| 2 | 3JAI|1|5+ 3JAI|1|8 | Large subunit ribosomal RNA + 5.8S ribosomal RNA | 28S ribosomal RNA, 5.8S ribosomal RNA | Oryctolagus cuniculus | Eukarya | RF02543 + RF00002 | Structure of a mammalian ribosomal termination complex with ABCE1, eRF1(AAQ), and the UGA stop codon | Electron microscopy | 3.65 | 2015-08-12 |
| 3 | 3JAG|1|5+ 3JAG|1|8 | Large subunit ribosomal RNA + 5.8S ribosomal RNA | 28S ribosomal RNA, 5.8S ribosomal RNA | Oryctolagus cuniculus | Eukarya | RF02543 + RF00002 | Structure of a mammalian ribosomal termination complex with ABCE1, eRF1(AAQ), and the UAA stop codon | Electron microscopy | 3.65 | 2015-08-12 |
| 4 | 3JAH|1|5+ 3JAH|1|8 | Large subunit ribosomal RNA + 5.8S ribosomal RNA | 28S ribosomal RNA, 5.8S ribosomal RNA | Oryctolagus cuniculus | Eukarya | RF02543 + RF00002 | Structure of a mammalian ribosomal termination complex with ABCE1, eRF1(AAQ), and the UAG stop codon | Electron microscopy | 3.45 | 2015-08-12 |
| 5 | 3JAJ|1|5+ 3JAJ|1|8 | Large subunit ribosomal RNA + 5.8S ribosomal RNA | 28S ribosomal RNA, 5.8S ribosomal RNA | Oryctolagus cuniculus | Eukarya | RF02543 + RF00002 | Structure of the engaged state of the mammalian SRP-ribosome complex | Electron microscopy | 3.75 | 2015-08-05 |
| 6 | 3JAN|1|5+ 3JAN|1|8 | Large subunit ribosomal RNA + 5.8S ribosomal RNA | 28S ribosomal RNA, 5.8S ribosomal RNA | Oryctolagus cuniculus | Eukarya | RF02543 + RF00002 | Structure of the scanning state of the mammalian SRP-ribosome complex | Electron microscopy | 3.75 | 2015-08-05 |
Parents
| This class | Parent classes | Release id | Intersection | Added to this class | Only in parent |
|---|
Children
| This class | Descendant classes | Release id | Intersection | Only in this class | Added to child |
|---|---|---|---|---|---|
| NR_4.0_65570.1 | NR_4.0_68613.1 | 6.0 | (5) 3J92|1|5+3J92|1|8, 3JAH|1|5+3JAH|1|8, 3JAN|1|5+3JAN|1|8, 3JAG|1|5+3JAG|1|8, 3JAI|1|5+3JAI|1|8 | (1) 3JAJ|1|5+3JAJ|1|8 | (0) |
Heat map of mutual geometric discrepancy, in Angstroms per nucleotide. Instances are ordered to put similar structures near each other. The colorbar ranges from 0 to the maximum observed discrepancy, up to 0.5
#S - ordering by similarity (same as in the heat map).| #S | PDB | Title | Method | Resolution | Length | NAKB_NA_annotation | NAKB_protein_annotation |
|---|---|---|---|---|---|---|---|
| 1 | 3JAI|1|5+3JAI|1|8 | Title: Structure of a mammalian ribosomal termination complex with ABCE1, eRF1(AAQ), and the UGA stop codon | ELECTRON MICROSCOPY | 3.65 | 3662 | ||
| 2 | 3JAH|1|5+3JAH|1|8 | Title: Structure of a mammalian ribosomal termination complex with ABCE1, eRF1(AAQ), and the UAG stop codon | ELECTRON MICROSCOPY | 3.45 | 3662 | ||
| 3 | 3JAG|1|5+3JAG|1|8 | Title: Structure of a mammalian ribosomal termination complex with ABCE1, eRF1(AAQ), and the UAA stop codon | ELECTRON MICROSCOPY | 3.65 | 3662 | ||
| 4 | 3JAN|1|5+3JAN|1|8 | Title: Structure of the scanning state of the mammalian SRP-ribosome complex | ELECTRON MICROSCOPY | 3.75 | 3658 | ||
| 5 | 3JAJ|1|5+3JAJ|1|8 | Title: Structure of the engaged state of the mammalian SRP-ribosome complex | ELECTRON MICROSCOPY | 3.75 | 3658 | ||
| 6 | 3J92|1|5+3J92|1|8 | Title: Structure and assembly pathway of the ribosome quality control complex | ELECTRON MICROSCOPY | 3.6 | 3662 |
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