Equivalence class NR_4.0_64524.1 Obsolete
# | IFE | Standardized name | Molecule | Organism | Source | Rfam | Title | Method | Res. Å | Date |
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1 | 2UUA|1|Y (rep) | 5'-R(*CP*CP*UP*CP*CP*CP*UP*CM0P*AP*CP*6MZP*AP *GP*GP*AP*GP*G)-3', 5'-R(*GP*UP*CP*AP*AP*AP)-3' | Thermus thermophilus | Bacteria | Structure of the Thermus thermophilus 30S ribosomal subunit complexed with a Valine-ASL with cmo5U in position 34 bound to an mRNA with a GUC-codon in the A-site and paromomycin. | X-ray diffraction | 2.9 | 2007-05-15 | ||
2 | 2UUC|1|Y | 5'-R(*CP*CP*UP*CP*CP*CP*UP*CM0P*AP*CP*6MZP*AP *GP*GP*AP*GP*G)-3', 5'-R(*GP*UP*AP*AP*AP*AP)-3' | Structure of the Thermus thermophilus 30S ribosomal subunit complexed with a Valine-ASL with cmo5U in position 34 bound to an mRNA with a GUA-codon in the A-site and paromomycin. | X-ray diffraction | 3.1 | 2007-05-22 | ||||
3 | 2UU9|1|Y | RNA | Thermus thermophilus | Bacteria | Structure of the Thermus thermophilus 30S ribosomal subunit complexed with a Valine-ASL with cmo5U in position 34 bound to an mRNA with a GUG-codon in the A-site and paromomycin. | X-ray diffraction | 3.1 | 2007-05-15 | ||
4 | 2UUB|1|Y | 5'-R(*CP*CP*UP*CP*CP*CP*UP*CM0P*AP*CP*6MZP*AP *GP*GP*AP*GP*G)-3', 5'-R(*GP*UP*UP*AP*AP*AP)-3' | synthetic construct | Synthetic | Structure of the Thermus thermophilus 30S ribosomal subunit complexed with a Valine-ASL with cmo5U in position 34 bound to an mRNA with a GUU-codon in the A-site and paromomycin. | X-ray diffraction | 2.8 | 2007-05-15 |
Release history
Release | 2.0 |
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Date | 2014-12-05 |
Parents
This class | Parent classes | Release id | Intersection | Added to this class | Only in parent |
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Children
This class | Descendant classes | Release id | Intersection | Only in this class | Added to child |
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Heat map of mutual geometric discrepancy, in Angstroms per nucleotide. Instances are ordered to put similar structures near each other. The colorbar ranges from 0 to the maximum observed discrepancy, up to 0.5
#S - ordering by similarity (same as in the heat map).#S | PDB | Title | Method | Resolution | Length | NAKB_NA_annotation | NAKB_protein_annotation |
---|---|---|---|---|---|---|---|
1 | 2UUC|1|Y | Title: Structure of the Thermus thermophilus 30S ribosomal subunit complexed with a Valine-ASL with cmo5U in position 34 bound to an mRNA with a GUA-codon in the A-site and paromomycin. | X-RAY DIFFRACTION | 3.1 | 11 | ||
2 | 2UUA|1|Y | Title: Structure of the Thermus thermophilus 30S ribosomal subunit complexed with a Valine-ASL with cmo5U in position 34 bound to an mRNA with a GUC-codon in the A-site and paromomycin. | X-RAY DIFFRACTION | 2.9 | 11 | ||
3 | 2UU9|1|Y | Title: Structure of the Thermus thermophilus 30S ribosomal subunit complexed with a Valine-ASL with cmo5U in position 34 bound to an mRNA with a GUG-codon in the A-site and paromomycin. | X-RAY DIFFRACTION | 3.1 | 11 | ||
4 | 2UUB|1|Y | Title: Structure of the Thermus thermophilus 30S ribosomal subunit complexed with a Valine-ASL with cmo5U in position 34 bound to an mRNA with a GUU-codon in the A-site and paromomycin. | X-RAY DIFFRACTION | 2.8 | 9 |
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