#IFEStandardized nameMoleculeOrganismSourceRfamTitleMethodRes. ÅDate
13B5S|1|B (rep)Loop A Substrate strand, 29-mer Loop A and Loop B Ribozyme strand, Loop B S-turn strandMinimally Hinged Hairpin Ribozyme Incorporates A38DAP Mutation and 2'-O-methyl Modification at the Active SiteX-ray diffraction2.252008-08-12
23B5F|1|BLoop A Substrate strand, 29-mer Loop A and Loop B Ribozyme strand, Loop B S-turn strandCrystal Structure of a Minimally Hinged Hairpin Ribozyme Incorporating the Ade38Dap Mutation and a 2',5' Phosphodiester Linkage at the Active SiteX-ray diffraction2.72008-08-12
33BBI|1|BLoop A Substrate strand, Loop A and Loop B Ribozyme strand, Loop B S-turn strandMinimally Junctioned Hairpin Ribozyme Incorporating A38(2AP) and A-1 2'-O-Me Modifications near Active SiteX-ray diffraction2.352008-08-12
44G6P|1|BLoop A Substrate strand, Loop A and Loop B Ribozyme strand, Loop B of the Ribozyme StrandMinimal Hairpin Ribozyme in the Precatalytic State with A38P VariationX-ray diffraction2.642012-08-15
53B58|1|BLoop A Substrate strand, 29-mer Loop A and Loop B Ribozyme strand, Loop B S-turn strandMinimally Junctioned Hairpin Ribozyme Incorporates A38G Mutation and a 2',5'-Phosphodiester Linkage at the Active SiteX-ray diffraction2.652008-08-12
63BBM|1|BLoop A Substrate strand, Loop A and Loop B Ribozyme strand, Loop B S-turn strandMinimally Junctioned Hairpin Ribozyme Incorporates A38C and 2'O-Me Modification at Active SiteX-ray diffraction2.652008-08-12
74G6S|1|BLoop A Substrate strand, Loop A and Loop B Ribozyme strand, Loop B of the Ribozyme StrandMinimal Hairpin Ribozyme in the Transition State with A38P VariationX-ray diffraction2.842012-08-08
83BBK|1|BLoop A Substrate strand, Loop A and Loop B Ribozyme strand, Loop B S-turn strandMiminally Junctioned Hairpin Ribozyme Incorporates A38C and 2'5'-phosphodiester Linkage within Active SiteX-ray diffraction2.752008-08-12
93B91|1|BLoop A Substrate strand, 29-mer Loop A and Loop B Ribozyme strand, Loop B S-turn strandMinimally Hinged Hairpin Ribozyme Incorporates Ade38(2AP) and 2',5'-Phosphodiester Linkage Mutations at the Active SiteX-ray diffraction2.752008-08-12
103B5A|1|BLoop A Substrate strand, 29-mer Loop A and Loop B Ribozyme strand, Loop B S-turn strandCrystal Structure of a Minimally Hinged Hairpin Ribozyme Incorporating A38G mutation with a 2'OMe modification at the active siteX-ray diffraction2.352008-08-12

Release history

Release2.0
Date2014-12-05

Parents

This classParent classesRelease idIntersectionAdded to this classOnly in parent

Children

This class Descendant classesRelease idIntersectionOnly in this classAdded to child

Heat map of mutual geometric discrepancy, in Angstroms per nucleotide. Instances are ordered to put similar structures near each other. The colorbar ranges from 0 to the maximum observed discrepancy, up to 0.5

#S - ordering by similarity (same as in the heat map).
#SPDBTitleMethodResolutionLengthNAKB_NA_annotationNAKB_protein_annotation
13B5F|1|BTitle: Crystal Structure of a Minimally Hinged Hairpin Ribozyme Incorporating the Ade38Dap Mutation and a 2',5' Phosphodiester Linkage at the Active SiteX-RAY DIFFRACTION2.729
23B58|1|BTitle: Minimally Junctioned Hairpin Ribozyme Incorporates A38G Mutation and a 2',5'-Phosphodiester Linkage at the Active SiteX-RAY DIFFRACTION2.6529
33B91|1|BTitle: Minimally Hinged Hairpin Ribozyme Incorporates Ade38(2AP) and 2',5'-Phosphodiester Linkage Mutations at the Active SiteX-RAY DIFFRACTION2.7529
44G6S|1|BTitle: Minimal Hairpin Ribozyme in the Transition State with A38P VariationX-RAY DIFFRACTION2.8429
53BBM|1|BTitle: Minimally Junctioned Hairpin Ribozyme Incorporates A38C and 2'O-Me Modification at Active SiteX-RAY DIFFRACTION2.6529
64G6P|1|BTitle: Minimal Hairpin Ribozyme in the Precatalytic State with A38P VariationX-RAY DIFFRACTION2.6429
73B5S|1|BTitle: Minimally Hinged Hairpin Ribozyme Incorporates A38DAP Mutation and 2'-O-methyl Modification at the Active SiteX-RAY DIFFRACTION2.2529
83BBI|1|BTitle: Minimally Junctioned Hairpin Ribozyme Incorporating A38(2AP) and A-1 2'-O-Me Modifications near Active SiteX-RAY DIFFRACTION2.3529
93B5A|1|BTitle: Crystal Structure of a Minimally Hinged Hairpin Ribozyme Incorporating A38G mutation with a 2'OMe modification at the active siteX-RAY DIFFRACTION2.3529
103BBK|1|BTitle: Miminally Junctioned Hairpin Ribozyme Incorporates A38C and 2'5'-phosphodiester Linkage within Active SiteX-RAY DIFFRACTION2.7529

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