NR_4.0_63819.3

Members (14)
History
Heat map

#	IFE	Standardized name	Molecule	Organism	Source	Rfam	Title	Method	Res. Å	Date
1	4WF9\|1\|X (rep)	Large subunit ribosomal RNA	23S ribosomal RNA	Staphylococcus aureus	Bacteria	RF02541	The crystal structure of the large ribosomal subunit of Staphylococcus aureus in complex with telithromycin	X-ray diffraction	3.43	2015-10-21
2	4WFA\|1\|X	Large subunit ribosomal RNA	23S rRNA	Staphylococcus aureus	Bacteria	RF02541	The crystal structure of the large ribosomal subunit of Staphylococcus aureus in complex with linezolid	X-ray diffraction	3.39	2015-10-21
3	4WCE\|1\|X	Large subunit ribosomal RNA	23S rRNA	Staphylococcus aureus	Bacteria	RF02541	The crystal structure of the large ribosomal subunit of Staphylococcus aureus	X-ray diffraction	3.53	2015-10-21
4	4WFB\|1\|X	Large subunit ribosomal RNA	23S rRNA	Staphylococcus aureus	Bacteria	RF02541	The crystal structure of the large ribosomal subunit of Staphylococcus aureus in complex with BC-3205	X-ray diffraction	3.43	2015-10-21
5	5NRG\|1\|X	Large subunit ribosomal RNA	23S ribosomal RNA	Staphylococcus aureus	Bacteria	RF02541	The crystal structure of the large ribosomal subunit of Staphylococcus aureus in complex with RB02	X-ray diffraction	3.44	2017-08-09
6	5HL7\|1\|X	Large subunit ribosomal RNA	23S ribosomal RNA	Staphylococcus aureus	Bacteria	RF02541	The crystal structure of the large ribosomal subunit of Staphylococcus aureus in complex with lefamulin	X-ray diffraction	3.55	2016-12-21
7	5HKV\|1\|X	Large subunit ribosomal RNA	23s ribosomal RNA	Staphylococcus aureus	Bacteria	RF02541	The crystal structure of the large ribosomal subunit of Staphylococcus aureus in complex with lincomycin	X-ray diffraction	3.66	2017-05-03
8	6HMA\|1\|A	Large subunit ribosomal RNA	23S ribosomal RNA	Staphylococcus aureus	Bacteria	RF02541	Improved model derived from cryo-EM map of Staphylococcus aureus large ribosomal subunit	Electron microscopy	2.65	2018-11-14
9	5NGM\|1\|AA	Large subunit ribosomal RNA	23S Ribosomal RNA	Staphylococcus aureus	Bacteria	RF02541	2.9S structure of the 70S ribosome composing the S. aureus 100S complex	Electron microscopy	2.9	2017-10-04
10	5T7V\|1\|B	Large subunit ribosomal RNA	23S ribosomal RNA	Staphylococcus aureus	Bacteria	RF02541	Methicillin Resistant, Linezolid resistant Staphylococcus aureus 70S ribosome (delta S145 uL3)	Electron microscopy	3.6	2017-05-31
11	5ND8\|1\|A	Large subunit ribosomal RNA	23S ribosomal RNA	Staphylococcus aureus	Bacteria	RF02541	Hibernating ribosome from Staphylococcus aureus (Unrotated state)	Electron microscopy	3.7	2017-06-28
12	5ND9\|1\|A	Large subunit ribosomal RNA	23S ribosomal RNA	Staphylococcus aureus	Bacteria	RF02541	Hibernating ribosome from Staphylococcus aureus (Rotated state)	Electron microscopy	3.7	2017-06-28
13	5LI0\|1\|A	Large subunit ribosomal RNA	23S ribosomal RNA	Staphylococcus aureus	Bacteria	RF02541	70S ribosome from Staphylococcus aureus	Electron microscopy	3.8	2016-12-28
14	5TCU\|1\|B	Large subunit ribosomal RNA	23S RRNA	Staphylococcus aureus	Bacteria	RF02541	Methicillin sensitive Staphylococcus aureus 70S ribosome	Electron microscopy	3.9	2017-05-24

Release history

Release	9.16	9.17	9.18	9.19	9.20	9.21	9.22	9.23	9.24
Date	2018-11-16	2018-11-23	2018-11-30	2018-12-05	2018-12-12	2018-12-19	2018-12-26	2019-01-02	2019-01-09

Parents

This class	Parent classes	Release id	Intersection	Added to this class	Only in parent
NR_4.0_63819.3	NR_4.0_63819.2	9.16	(13) 5TCU\|1\|B, 5T7V\|1\|B, 5NRG\|1\|X, 5NGM\|1\|AA, 5ND9\|1\|A, 5ND8\|1\|A, 5LI0\|1\|A, 5HL7\|1\|X, 5HKV\|1\|X, 4WFB\|1\|X, 4WFA\|1\|X, 4WF9\|1\|X, 4WCE\|1\|X	(1) 6HMA\|1\|A	(0)

Children

This class	Descendant classes	Release id	Intersection	Only in this class	Added to child

Heat map of mutual geometric discrepancy, in Angstroms per nucleotide. Instances are ordered to put similar structures near each other. The colorbar ranges from 0 to the maximum observed discrepancy, up to 0.5

#S - ordering by similarity (same as in the heat map).

#S	PDB	Title	Method	Resolution	Length
1	5T7V\|1\|B	Title: Methicillin Resistant, Linezolid resistant Staphylococcus aureus 70S ribosome (delta S145 uL3)	ELECTRON MICROSCOPY	3.6	2768
2	5TCU\|1\|B	Title: Methicillin sensitive Staphylococcus aureus 70S ribosome	ELECTRON MICROSCOPY	3.9	2755
3	5ND9\|1\|A	Title: Hibernating ribosome from Staphylococcus aureus (Rotated state)	ELECTRON MICROSCOPY	3.7	2914
4	5ND8\|1\|A	Title: Hibernating ribosome from Staphylococcus aureus (Unrotated state)	ELECTRON MICROSCOPY	3.7	2912
5	5LI0\|1\|A	Title: 70S ribosome from Staphylococcus aureus	ELECTRON MICROSCOPY	3.8	2914
6	4WF9\|1\|X	Title: The crystal structure of the large ribosomal subunit of Staphylococcus aureus in complex with telithromycin	X-RAY DIFFRACTION	3.43	2712
7	4WFB\|1\|X	Title: The crystal structure of the large ribosomal subunit of Staphylococcus aureus in complex with BC-3205	X-RAY DIFFRACTION	3.43	2707
8	4WFA\|1\|X	Title: The crystal structure of the large ribosomal subunit of Staphylococcus aureus in complex with linezolid	X-RAY DIFFRACTION	3.39	2711
9	4WCE\|1\|X	Title: The crystal structure of the large ribosomal subunit of Staphylococcus aureus	X-RAY DIFFRACTION	3.53	2708
10	5HL7\|1\|X	Title: The crystal structure of the large ribosomal subunit of Staphylococcus aureus in complex with lefamulin	X-RAY DIFFRACTION	3.55	2705
11	5HKV\|1\|X	Title: The crystal structure of the large ribosomal subunit of Staphylococcus aureus in complex with lincomycin	X-RAY DIFFRACTION	3.66	2695
12	5NRG\|1\|X	Title: The crystal structure of the large ribosomal subunit of Staphylococcus aureus in complex with RB02	X-RAY DIFFRACTION	3.44	2711
13	5NGM\|1\|AA	Title: 2.9S structure of the 70S ribosome composing the S. aureus 100S complex	ELECTRON MICROSCOPY	2.9	2905
14	6HMA\|1\|A	Title: Improved model derived from cryo-EM map of Staphylococcus aureus large ribosomal subunit	ELECTRON MICROSCOPY	2.65	2831

Coloring options: Nucleotide numbers

Equivalence class NR_4.0_63819.3 Current

Release history

Parents

Children