Equivalence class NR_4.0_63586.1 Obsolete
| # | IFE | Standardized name | Molecule | Organism | Source | Rfam | Title | Method | Res. Å | Date |
|---|---|---|---|---|---|---|---|---|---|---|
| 1 | 3NJ6|1|A (rep) | 5'-R(*GP*GP*CP*AP*GP*CP*AP*GP*CP*C)-3' | 0.95 A resolution X-ray structure of (GGCAGCAGCC)2 | X-ray diffraction | 0.95 | 2010-08-25 | ||||
| 2 | 3NJ7|1|A+ 3NJ7|1|B | 5'-R(*GP*GP*CP*AP*GP*CP*AP*GP*CP*C)-3' | 1.9 A resolution X-ray structure of (GGCAGCAGCC)2 | X-ray diffraction | 1.9 | 2010-08-25 | ||||
| 3 | 3NJ7|1|C+ 3NJ7|1|D | 5'-R(*GP*GP*CP*AP*GP*CP*AP*GP*CP*C)-3' | 1.9 A resolution X-ray structure of (GGCAGCAGCC)2 | X-ray diffraction | 1.9 | 2010-08-25 | ||||
| 4 | 3NJ7|1|E+ 3NJ7|1|F | 5'-R(*GP*GP*CP*AP*GP*CP*AP*GP*CP*C)-3' | 1.9 A resolution X-ray structure of (GGCAGCAGCC)2 | X-ray diffraction | 1.9 | 2010-08-25 |
Parents
| This class | Parent classes | Release id | Intersection | Added to this class | Only in parent |
|---|---|---|---|---|---|
| NR_4.0_63586.1 | NR_all_37821.1 | 3.0 | (1) 3NJ6|1|A | (3) 3NJ7|1|A+3NJ7|1|B, 3NJ7|1|C+3NJ7|1|D, 3NJ7|1|E+3NJ7|1|F | (3) 3NJ7|1|A, 3NJ7|1|C, 3NJ7|1|E |
Children
| This class | Descendant classes | Release id | Intersection | Only in this class | Added to child |
|---|---|---|---|---|---|
| NR_4.0_63586.1 | NR_4.0_25855.1 | 6.0 | (1) 3NJ6|1|A | (3) 3NJ7|1|A+3NJ7|1|B, 3NJ7|1|C+3NJ7|1|D, 3NJ7|1|E+3NJ7|1|F | (0) |
Heat map of mutual geometric discrepancy, in Angstroms per nucleotide. Instances are ordered to put similar structures near each other. The colorbar ranges from 0 to the maximum observed discrepancy, up to 0.5
#S - ordering by similarity (same as in the heat map).| #S | PDB | Title | Method | Resolution | Length | NAKB_NA_annotation | NAKB_protein_annotation |
|---|---|---|---|---|---|---|---|
| 1 | 3NJ7|1|E+3NJ7|1|F | Title: 1.9 A resolution X-ray structure of (GGCAGCAGCC)2 | X-RAY DIFFRACTION | 1.9 | 10 | ||
| 2 | 3NJ7|1|C+3NJ7|1|D | Title: 1.9 A resolution X-ray structure of (GGCAGCAGCC)2 | X-RAY DIFFRACTION | 1.9 | 10 | ||
| 3 | 3NJ7|1|A+3NJ7|1|B | Title: 1.9 A resolution X-ray structure of (GGCAGCAGCC)2 | X-RAY DIFFRACTION | 1.9 | 10 | ||
| 4 | 3NJ6|1|A | Title: 0.95 A resolution X-ray structure of (GGCAGCAGCC)2 | X-RAY DIFFRACTION | 0.95 | 10 |
Coloring options: