Equivalence class NR_4.0_56037.1 Obsolete
| # | IFE | Standardized name | Molecule | Organism | Source | Rfam | Title | Method | Res. Å | Date |
|---|---|---|---|---|---|---|---|---|---|---|
| 1 | 4LX6|1|A (rep) | Purine riboswitch | Mutated adenine riboswitch aptamer | Vibrio vulnificus | Bacteria | RF00167 | X-ray crystal structure of the M6C' riboswitch aptamer bound to 2-aminopyrimido[4,5-d]pyrimidin-4(3H)-one (PPAO) | X-ray diffraction | 2.15 | 2014-07-16 |
| 2 | 3LA5|1|A | Purine riboswitch | Adenosine RIboswitch | Bacillus subtilis | Bacteria | RF00167 | X-ray crystal structure of mc6 RNA Riboswitch bound to azacytosine | X-ray diffraction | 1.7 | 2010-01-26 |
| 3 | 4LX5|1|A | Purine riboswitch | Mutated adenine riboswitch aptamer | Vibrio vulnificus | Bacteria | RF00167 | X-ray crystal structure of the M6' riboswitch aptamer bound to pyrimido[4,5-d]pyrimidine-2,4-diamine (PPDA) | X-ray diffraction | 2.13 | 2014-07-16 |
Parents
| This class | Parent classes | Release id | Intersection | Added to this class | Only in parent |
|---|
Children
| This class | Descendant classes | Release id | Intersection | Only in this class | Added to child |
|---|---|---|---|---|---|
| NR_4.0_56037.1 | NR_4.0_38023.1 | 6.0 | (1) 4LX6|1|A | (2) 3LA5|1|A, 4LX5|1|A | (0) |
Heat map of mutual geometric discrepancy, in Angstroms per nucleotide. Instances are ordered to put similar structures near each other. The colorbar ranges from 0 to the maximum observed discrepancy, up to 0.5
#S - ordering by similarity (same as in the heat map).| #S | PDB | Title | Method | Resolution | Length | NAKB_NA_annotation | NAKB_protein_annotation |
|---|---|---|---|---|---|---|---|
| 1 | 4LX5|1|A | Title: X-ray crystal structure of the M6' riboswitch aptamer bound to pyrimido[4,5-d]pyrimidine-2,4-diamine (PPDA) | X-RAY DIFFRACTION | 2.13 | 71 | ||
| 2 | 4LX6|1|A | Title: X-ray crystal structure of the M6C' riboswitch aptamer bound to 2-aminopyrimido[4,5-d]pyrimidin-4(3H)-one (PPAO) | X-RAY DIFFRACTION | 2.15 | 71 | ||
| 3 | 3LA5|1|A | Title: X-ray crystal structure of mc6 RNA Riboswitch bound to azacytosine | X-RAY DIFFRACTION | 1.7 | 71 |
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