Equivalence class NR_4.0_55776.1 Obsolete
| # | IFE | Standardized name | Molecule | Organism | Source | Rfam | Title | Method | Res. Å | Date |
|---|---|---|---|---|---|---|---|---|---|---|
| 1 | 5GAN|1|V+ 5GAN|1|W (rep) | U4 spliceosomal RNA + U6 spliceosomal RNA | U4 snRNA, U6 snRNA | Saccharomyces cerevisiae | Eukarya | RF00015 + RF00026 | The overall structure of the yeast spliceosomal U4/U6.U5 tri-snRNP at 3.7 Angstrom | Electron microscopy | 3.7 | 2016-01-27 |
| 2 | 3JCM|1|E | U4 spliceosomal RNA | SNR14 snRNA, SNR6 snRNA, pre-mRNA | Saccharomyces cerevisiae | Eukarya | RF00015 | Cryo-EM structure of the spliceosomal U4/U6.U5 tri-snRNP | Electron microscopy | 3.8 | 2016-02-24 |
Release history
Parents
| This class | Parent classes | Release id | Intersection | Added to this class | Only in parent |
|---|---|---|---|---|---|
| NR_4.0_55776.1 | NR_4.0_02699.1 | 8.0 | (1) 5GAN|1|V+5GAN|1|W | (1) 3JCM|1|E | (0) |
| NR_4.0_55776.1 | NR_4.0_80678.1 | 8.0 | (1) 3JCM|1|E | (1) 5GAN|1|V+5GAN|1|W | (0) |
Children
| This class | Descendant classes | Release id | Intersection | Only in this class | Added to child |
|---|---|---|---|---|---|
| NR_4.0_55776.1 | NR_4.0_55776.2 | 9.16 | (1) 5GAN|1|V+5GAN|1|W | (1) 3JCM|1|E | (0) |
| NR_4.0_55776.1 | NR_4.0_87805.1 | 9.16 | (1) 3JCM|1|E | (1) 5GAN|1|V+5GAN|1|W | (0) |
Heat map of mutual geometric discrepancy, in Angstroms per nucleotide. Instances are ordered to put similar structures near each other. The colorbar ranges from 0 to the maximum observed discrepancy, up to 0.5
#S - ordering by similarity (same as in the heat map).| #S | PDB | Title | Method | Resolution | Length | NAKB_NA_annotation | NAKB_protein_annotation |
|---|---|---|---|---|---|---|---|
| 1 | 5GAN|1|V+5GAN|1|W | Title: The overall structure of the yeast spliceosomal U4/U6.U5 tri-snRNP at 3.7 Angstrom | ELECTRON MICROSCOPY | 3.7 | 124 | ||
| 2 | 3JCM|1|E | Title: Cryo-EM structure of the spliceosomal U4/U6.U5 tri-snRNP | ELECTRON MICROSCOPY | 3.8 | 85 |
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