Equivalence class NR_4.0_51735.2 Obsolete
| # | IFE | Standardized name | Molecule | Organism | Source | Rfam | Title | Method | Res. Å | Date |
|---|---|---|---|---|---|---|---|---|---|---|
| 1 | 3J7P|1|5+ 3J7P|1|8 (rep) | Large subunit ribosomal RNA + 5.8S ribosomal RNA | 28S ribosomal RNA, 5.8S ribosomal RNA | Sus scrofa | Eukarya | RF02543 + RF00002 | Structure of the 80S mammalian ribosome bound to eEF2 | Electron microscopy | 3.5 | 2014-09-03 |
| 2 | 3J7Q|1|5+ 3J7Q|1|8 | Large subunit ribosomal RNA + 5.8S ribosomal RNA | 28S ribosomal RNA, 5.8S ribosomal RNA | Sus scrofa | Eukarya | RF02543 + RF00002 | Structure of the idle mammalian ribosome-Sec61 complex | Electron microscopy | 3.4 | 2014-09-03 |
| 3 | 3J7R|1|5+ 3J7R|1|8 | Large subunit ribosomal RNA + 5.8S ribosomal RNA | 28S ribosomal RNA, 5.8S ribosomal RNA | Sus scrofa | Eukarya | RF02543 + RF00002 | Structure of the translating mammalian ribosome-Sec61 complex | Electron microscopy | 3.9 | 2014-09-03 |
Release history
| Release | 6.0 |
|---|---|
| Date | 2017-04-04 |
Parents
| This class | Parent classes | Release id | Intersection | Added to this class | Only in parent |
|---|---|---|---|---|---|
| NR_4.0_51735.2 | NR_4.0_51735.1 | 6.0 | (3) 3J7P|1|5+3J7P|1|8, 3J7R|1|5+3J7R|1|8, 3J7Q|1|5+3J7Q|1|8 | (0) | (1) 3J7O|1|5+3J7O|1|8 |
Children
| This class | Descendant classes | Release id | Intersection | Only in this class | Added to child |
|---|---|---|---|---|---|
| NR_4.0_51735.2 | NR_4.0_51735.3 | 7.0 | (3) 3J7R|1|5+3J7R|1|8, 3J7Q|1|5+3J7Q|1|8, 3J7P|1|5+3J7P|1|8 | (0) | (1) 3J7O|1|5+3J7O|1|8 |
Heat map of mutual geometric discrepancy, in Angstroms per nucleotide. Instances are ordered to put similar structures near each other. The colorbar ranges from 0 to the maximum observed discrepancy, up to 0.5
#S - ordering by similarity (same as in the heat map).| #S | PDB | Title | Method | Resolution | Length | NAKB_NA_annotation | NAKB_protein_annotation |
|---|---|---|---|---|---|---|---|
| 1 | 3J7P|1|5+3J7P|1|8 | Title: Structure of the 80S mammalian ribosome bound to eEF2 | ELECTRON MICROSCOPY | 3.5 | 3662 | ||
| 2 | 3J7Q|1|5+3J7Q|1|8 | Title: Structure of the idle mammalian ribosome-Sec61 complex | ELECTRON MICROSCOPY | 3.4 | 3662 | ||
| 3 | 3J7R|1|5+3J7R|1|8 | Title: Structure of the translating mammalian ribosome-Sec61 complex | ELECTRON MICROSCOPY | 3.9 | 3720 |
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