Equivalence class NR_4.0_47503.2 Obsolete
| # | IFE | Standardized name | Molecule | Organism | Source | Rfam | Title | Method | Res. Å | Date |
|---|---|---|---|---|---|---|---|---|---|---|
| 1 | 6EK0|1|S2 (rep) | Small subunit ribosomal RNA | 18S ribosomal RNA | Homo sapiens | Eukarya | High-resolution cryo-EM structure of the human 80S ribosome | Electron microscopy | 2.9 | 2018-01-24 | |
| 2 | 4UG0|1|S2 | Small subunit ribosomal RNA | 18S ribosomal RNA | Homo sapiens | Eukarya | RF01960 | STRUCTURE OF THE HUMAN 80S RIBOSOME | Electron microscopy | 3.6 | 2015-06-10 |
| 3 | 5AJ0|1|B1 | Small subunit ribosomal RNA | 18S ribosomal RNA | Homo sapiens | Eukarya | RF01960 | Cryo electron microscopy of actively translating human polysomes (POST state). | Electron microscopy | 3.5 | 2015-05-20 |
| 4 | 5A2Q|1|2 | Small subunit ribosomal RNA | 18S RRNA | Homo sapiens | Eukarya | RF01960 | Structure of the HCV IRES bound to the human ribosome | Electron microscopy | 3.9 | 2015-07-15 |
| 5 | 5LKS|1|S2 | Small subunit ribosomal RNA | 18S ribosomal RNA | Homo sapiens | Eukarya | RF01960 | Structure-function insights reveal the human ribosome as a cancer target for antibiotics | Electron microscopy | 3.6 | 2017-04-26 |
| 6 | 5T2C|1|AA | Small subunit ribosomal RNA | 18S rRNA | Homo sapiens | Eukarya | RF01960 | CryoEM structure of the human ribosome at 3.6 Angstrom resolution | Electron microscopy | 3.6 | 2017-01-25 |
| 7 | 5A8L|1|B | Small subunit ribosomal RNA | HUMAN 18S RIBOSOMAL RNA | Homo sapiens | Eukarya | RF01960 | Human eRF1 and the hCMV nascent peptide in the translation termination complex | Electron microscopy | 3.8 | 2015-12-02 |
Parents
Heat map of mutual geometric discrepancy, in Angstroms per nucleotide. Instances are ordered to put similar structures near each other. The colorbar ranges from 0 to the maximum observed discrepancy, up to 0.5
#S - ordering by similarity (same as in the heat map).| #S | PDB | Title | Method | Resolution | Length | NAKB_NA_annotation | NAKB_protein_annotation |
|---|---|---|---|---|---|---|---|
| 1 | 5A8L|1|B | Title: Human eRF1 and the hCMV nascent peptide in the translation termination complex | ELECTRON MICROSCOPY | 3.8 | 67 | ||
| 2 | 6EK0|1|S2 | Title: High-resolution cryo-EM structure of the human 80S ribosome | ELECTRON MICROSCOPY | 2.9 | 1706 | ||
| 3 | 5AJ0|1|B1 | Title: Cryo electron microscopy of actively translating human polysomes (POST state). | ELECTRON MICROSCOPY | 3.5 | 1708 | ||
| 4 | 5LKS|1|S2 | Title: Structure-function insights reveal the human ribosome as a cancer target for antibiotics | ELECTRON MICROSCOPY | 3.6 | 1742 | ||
| 5 | 4UG0|1|S2 | Title: STRUCTURE OF THE HUMAN 80S RIBOSOME | ELECTRON MICROSCOPY | 3.6 | 1742 | ||
| 6 | 5T2C|1|AA | Title: CryoEM structure of the human ribosome at 3.6 Angstrom resolution | ELECTRON MICROSCOPY | 3.6 | 1742 | ||
| 7 | 5A2Q|1|2 | Title: Structure of the HCV IRES bound to the human ribosome | ELECTRON MICROSCOPY | 3.9 | 1665 |
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