Equivalence class NR_4.0_47331.2 Obsolete
| # | IFE | Standardized name | Molecule | Organism | Source | Rfam | Title | Method | Res. Å | Date |
|---|---|---|---|---|---|---|---|---|---|---|
| 1 | 2UWM|1|D (rep) | 5'-R(*GP*GP*CP*GP*UP*UP*GP*CP*CP*GP *GP*UP*CP*UP*GP*GP*CP*AP*AP*CP*GP*CP*C)-3' | Moorella thermoacetica | Bacteria | C-TERMINAL DOMAIN(WH2-WH4) OF ELONGATION FACTOR SELB IN COMPLEX WITH SECIS RNA | X-ray diffraction | 2.31 | 2007-05-08 | ||
| 2 | 2PLY|1|C | RNA (5'-R(*GP*GP*CP*GP*UP*UP*GP*CP*CP*GP*GP*UP*CP*UP*GP*GP*CP*AP*AP*CP*GP*CP*C)-3') | Structure of the mRNA binding fragment of elongation factor SelB in complex with SECIS RNA. | X-ray diffraction | 2.6 | 2007-11-06 | ||||
| 3 | 2PLY|1|E | RNA (5'-R(*GP*GP*CP*GP*UP*UP*GP*CP*CP*GP*GP*UP*CP*UP*GP*GP*CP*AP*AP*CP*GP*CP*C)-3') | Structure of the mRNA binding fragment of elongation factor SelB in complex with SECIS RNA. | X-ray diffraction | 2.6 | 2007-11-06 | ||||
| 4 | 1WSU|1|E | 5'-R(*GP*GP*CP*GP*UP*UP*GP*CP*CP*GP*GP*UP*CP*U*GP*GP*CP*AP*AP*CP*GP*CP*C)-3' | C-terminal domain of elongation factor selB complexed with SECIS RNA | X-ray diffraction | 2.3 | 2005-01-25 | ||||
| 5 | 1WSU|1|F | 5'-R(*GP*GP*CP*GP*UP*UP*GP*CP*CP*GP*GP*UP*CP*U*GP*GP*CP*AP*AP*CP*GP*CP*C)-3' | C-terminal domain of elongation factor selB complexed with SECIS RNA | X-ray diffraction | 2.3 | 2005-01-25 | ||||
| 6 | 2UWM|1|C | 5'-R(*GP*GP*CP*GP*UP*UP*GP*CP*CP*GP *GP*UP*CP*UP*GP*GP*CP*AP*AP*CP*GP*CP*C)-3' | Moorella thermoacetica | Bacteria | C-TERMINAL DOMAIN(WH2-WH4) OF ELONGATION FACTOR SELB IN COMPLEX WITH SECIS RNA | X-ray diffraction | 2.31 | 2007-05-08 | ||
| 7 | 1WSU|1|G | 5'-R(*GP*GP*CP*GP*UP*UP*GP*CP*CP*GP*GP*UP*CP*U*GP*GP*CP*AP*AP*CP*GP*CP*C)-3' | C-terminal domain of elongation factor selB complexed with SECIS RNA | X-ray diffraction | 2.3 | 2005-01-25 |
Release history
| Release | 5.0 |
|---|---|
| Date | 2016-07-25 |
Parents
Children
| This class | Descendant classes | Release id | Intersection | Only in this class | Added to child |
|---|---|---|---|---|---|
| NR_4.0_47331.2 | NR_4.0_29679.1 | 6.0 | (1) 2UWM|1|D | (6) 2UWM|1|C, 1WSU|1|E, 1WSU|1|G, 2PLY|1|E, 1WSU|1|F, 2PLY|1|C | (0) |
| NR_4.0_47331.2 | NR_4.0_78990.1 | 6.0 | (1) 2UWM|1|C | (6) 1WSU|1|F, 2PLY|1|C, 2UWM|1|D, 1WSU|1|E, 1WSU|1|G, 2PLY|1|E | (0) |
Heat map of mutual geometric discrepancy, in Angstroms per nucleotide. Instances are ordered to put similar structures near each other. The colorbar ranges from 0 to the maximum observed discrepancy, up to 0.5
#S - ordering by similarity (same as in the heat map).| #S | PDB | Title | Method | Resolution | Length | NAKB_NA_annotation | NAKB_protein_annotation |
|---|---|---|---|---|---|---|---|
| 1 | 2PLY|1|E | Title: Structure of the mRNA binding fragment of elongation factor SelB in complex with SECIS RNA. | X-RAY DIFFRACTION | 2.6 | 23 | ||
| 2 | 2UWM|1|C | Title: C-TERMINAL DOMAIN(WH2-WH4) OF ELONGATION FACTOR SELB IN COMPLEX WITH SECIS RNA | X-RAY DIFFRACTION | 2.31 | 23 | ||
| 3 | 1WSU|1|E | Title: C-terminal domain of elongation factor selB complexed with SECIS RNA | X-RAY DIFFRACTION | 2.3 | 22 | ||
| 4 | 1WSU|1|F | Title: C-terminal domain of elongation factor selB complexed with SECIS RNA | X-RAY DIFFRACTION | 2.3 | 22 | ||
| 5 | 1WSU|1|G | Title: C-terminal domain of elongation factor selB complexed with SECIS RNA | X-RAY DIFFRACTION | 2.3 | 21 | ||
| 6 | 2UWM|1|D | Title: C-TERMINAL DOMAIN(WH2-WH4) OF ELONGATION FACTOR SELB IN COMPLEX WITH SECIS RNA | X-RAY DIFFRACTION | 2.31 | 23 | ||
| 7 | 2PLY|1|C | Title: Structure of the mRNA binding fragment of elongation factor SelB in complex with SECIS RNA. | X-RAY DIFFRACTION | 2.6 | 23 |
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