#IFEStandardized nameMoleculeOrganismSourceRfamTitleMethodRes. ÅDate
15J7L|1|DA (rep)Large subunit ribosomal RNA23S rRNAEscherichia coliBacteriaRF02541Structure of the 70S E coli ribosome with the U1052G mutation in the 16S rRNA bound to tetracyclineX-ray diffraction32016-07-27
25J8A|1|DALarge subunit ribosomal RNA23S rRNAEscherichia coliBacteriaRF02541Structure of the E coli 70S ribosome with the U1052G mutation in 16S rRNA bound to tigecyclineX-ray diffraction3.12016-07-06
35JC9|1|DALarge subunit ribosomal RNA23S rRNAEscherichia coliBacteriaRF02541Structure of the Escherichia coli ribosome with the U1052G mutation in the 16S rRNAX-ray diffraction3.032016-07-06
44YBB|1|DALarge subunit ribosomal RNA23S rRNAEscherichia coliBacteriaRF02541High-resolution structure of the Escherichia coli ribosomeX-ray diffraction2.12015-03-18
55IT8|1|DALarge subunit ribosomal RNA23S rRNAEscherichia coliBacteriaRF02541High-resolution structure of the Escherichia coli ribosomeX-ray diffraction3.122016-07-27
64WOI|1|BALarge subunit ribosomal RNA23S ribosomal RNAEscherichia coliBacteriaRF025414,5-linked aminoglycoside antibiotics regulate the bacterial ribosome by targeting dynamic conformational processes within intersubunit bridge B2X-ray diffraction32015-08-05
74WOI|1|CALarge subunit ribosomal RNA23S ribosomal RNAEscherichia coliBacteriaRF025414,5-linked aminoglycoside antibiotics regulate the bacterial ribosome by targeting dynamic conformational processes within intersubunit bridge B2X-ray diffraction32015-08-05
85J91|1|DALarge subunit ribosomal RNA23S rRNAEscherichia coliBacteriaRF02541Structure of the Wild-type 70S E coli ribosome bound to TigecyclineX-ray diffraction2.962016-07-06
94V9P|1|EALarge subunit ribosomal RNA23S rRNAEscherichia coliBacteriaRF02541Control of ribosomal subunit rotation by elongation factor GX-ray diffraction2.92014-07-09
105J88|1|DALarge subunit ribosomal RNA23S rRNAEscherichia coliBacteriaRF02541Structure of the E coli 70S ribosome with the U1060A mutation in 16S rRNAX-ray diffraction3.322016-07-06
114V9P|1|CALarge subunit ribosomal RNA23S rRNAEscherichia coliBacteriaRF02541Control of ribosomal subunit rotation by elongation factor GX-ray diffraction2.92014-07-09
124V9P|1|GALarge subunit ribosomal RNA23S rRNAEscherichia coliBacteriaRF02541Control of ribosomal subunit rotation by elongation factor GX-ray diffraction2.92014-07-09
134V9P|1|AALarge subunit ribosomal RNA23S rRNAEscherichia coliBacteriaRF02541Control of ribosomal subunit rotation by elongation factor GX-ray diffraction2.92014-07-09
144V9D|1|CALarge subunit ribosomal RNA23S rRNAEscherichia coliBacteriaRF02541Structures of the bacterial ribosome in classical and hybrid states of tRNA bindingX-ray diffraction32014-07-09
154V9O|1|AALarge subunit ribosomal RNA23S rRNAEscherichia coliBacteriaRF02541Control of ribosomal subunit rotation by elongation factor GX-ray diffraction2.92014-07-09
164V9O|1|EALarge subunit ribosomal RNA23S rRNAEscherichia coliBacteriaRF02541Control of ribosomal subunit rotation by elongation factor GX-ray diffraction2.92014-07-09
174WWW|1|RALarge subunit ribosomal RNA23S rRNAEscherichia coliBacteriaRF02541Crystal structure of the E. coli ribosome bound to CEM-101X-ray diffraction3.12014-12-24
184V9O|1|CALarge subunit ribosomal RNA23S rRNAEscherichia coliBacteriaRF02541Control of ribosomal subunit rotation by elongation factor GX-ray diffraction2.92014-07-09
194V6C|1|BALarge subunit ribosomal RNA23S rRNAEscherichia coliBacteriaRF02541Crystal structure of the E. coli 70S ribosome in an intermediate state of ratchetingX-ray diffraction3.192014-07-09
205J7L|1|CALarge subunit ribosomal RNA23S rRNAEscherichia coliBacteriaRF02541Structure of the 70S E coli ribosome with the U1052G mutation in the 16S rRNA bound to tetracyclineX-ray diffraction32016-07-27
214U27|1|BALarge subunit ribosomal RNA23S rRNAEscherichia coliBacteriaRF02541Crystal structure of the E. coli ribosome bound to flopristin and linopristin.X-ray diffraction2.82014-07-30
224V7T|1|BALarge subunit ribosomal RNA23S rRNAEscherichia coliBacteriaRF02541Crystal structure of the E. coli ribosome bound to chloramphenicol.X-ray diffraction3.192014-07-09
234WF1|1|BALarge subunit ribosomal RNA23S rRNAEscherichia coliBacteriaRF02541Crystal structure of the E. coli ribosome bound to negamycin.X-ray diffraction3.092014-11-05
245J8A|1|CALarge subunit ribosomal RNA23S rRNAEscherichia coliBacteriaRF02541Structure of the E coli 70S ribosome with the U1052G mutation in 16S rRNA bound to tigecyclineX-ray diffraction3.12016-07-06
255JC9|1|CALarge subunit ribosomal RNA23S rRNAEscherichia coliBacteriaRF02541Structure of the Escherichia coli ribosome with the U1052G mutation in the 16S rRNAX-ray diffraction3.032016-07-06
264V7U|1|BALarge subunit ribosomal RNA23S rRNAEscherichia coliBacteriaRF02541Crystal structure of the E. coli ribosome bound to erythromycin.X-ray diffraction3.12014-07-09
274V7V|1|BALarge subunit ribosomal RNA23S rRNAEscherichia coliBacteriaRF02541Crystal structure of the E. coli ribosome bound to clindamycin.X-ray diffraction3.292014-07-09
284V52|1|DBLarge subunit ribosomal RNA23S rRNAEscherichia coliBacteriaRF02541Crystal structure of the bacterial ribosome from Escherichia coli in complex with neomycin.X-ray diffraction3.212014-07-09
294U24|1|BALarge subunit ribosomal RNA23S rRNAEscherichia coliBacteriaRF02541Crystal structure of the E. coli ribosome bound to dalfopristin.X-ray diffraction2.92014-07-30
304U25|1|BALarge subunit ribosomal RNA23S rRNAEscherichia coliBacteriaRF02541Crystal structure of the E. coli ribosome bound to virginiamycin M1.X-ray diffraction2.92014-07-30
314V9D|1|DALarge subunit ribosomal RNA23S rRNAEscherichia coliBacteriaRF02541Structures of the bacterial ribosome in classical and hybrid states of tRNA bindingX-ray diffraction32014-07-09
324U26|1|BALarge subunit ribosomal RNA23S rRNAEscherichia coliBacteriaRF02541Crystal structure of the E. coli ribosome bound to dalfopristin and quinupristin.X-ray diffraction2.82014-07-30
334V7S|1|BALarge subunit ribosomal RNA23S rRNAEscherichia coliBacteriaRF02541Crystal structure of the E. coli ribosome bound to telithromycin.X-ray diffraction3.252014-07-09
344V57|1|DBLarge subunit ribosomal RNA23S rRNAEscherichia coliBacteriaRF02541Crystal structure of the bacterial ribosome from Escherichia coli in complex with spectinomycin and neomycin.X-ray diffraction3.52014-07-09
354V52|1|BBLarge subunit ribosomal RNA23S rRNAEscherichia coliBacteriaRF02541Crystal structure of the bacterial ribosome from Escherichia coli in complex with neomycin.X-ray diffraction3.212014-07-09
364V57|1|BBLarge subunit ribosomal RNA23S rRNAEscherichia coliBacteriaRF02541Crystal structure of the bacterial ribosome from Escherichia coli in complex with spectinomycin and neomycin.X-ray diffraction3.52014-07-09
374V9O|1|GALarge subunit ribosomal RNA23S rRNAEscherichia coliBacteriaRF02541Control of ribosomal subunit rotation by elongation factor GX-ray diffraction2.92014-07-09
384U1U|1|BALarge subunit ribosomal RNA23S rRNAEscherichia coliBacteriaRF02541Crystal structure of the E. coli ribosome bound to quinupristin.X-ray diffraction2.952014-07-30
394V85|1|BALarge subunit ribosomal RNA23S rRNAEscherichia coliBacteriaRF02541Crystal Structure of Release Factor RF3 Trapped in the GTP State on a Rotated Conformation of the Ribosome.X-ray diffraction3.22014-07-09
404V54|1|DBLarge subunit ribosomal RNA23S rRNAEscherichia coliBacteriaRF02541Crystal structure of the bacterial ribosome from Escherichia coli in complex with ribosome recycling factor (RRF).X-ray diffraction3.32014-07-09
414V64|1|DBLarge subunit ribosomal RNA23S ribosomal RNAEscherichia coliBacteriaRF02541Crystal structure of the bacterial ribosome from Escherichia coli in complex with hygromycin B.X-ray diffraction3.52014-07-09
424V50|1|DBLarge subunit ribosomal RNA23S ribosomal RNAEscherichia coliBacteriaRF02541Crystal Structure of Ribosome with messenger RNA and the Anticodon stem-loop of P-site tRNA.X-ray diffraction3.222014-07-09
434V54|1|BBLarge subunit ribosomal RNA23S rRNAEscherichia coliBacteriaRF02541Crystal structure of the bacterial ribosome from Escherichia coli in complex with ribosome recycling factor (RRF).X-ray diffraction3.32014-07-09
444V64|1|BBLarge subunit ribosomal RNA23S ribosomal RNAEscherichia coliBacteriaRF02541Crystal structure of the bacterial ribosome from Escherichia coli in complex with hygromycin B.X-ray diffraction3.52014-07-09
454V53|1|DBLarge subunit ribosomal RNA23S rRNAEscherichia coliBacteriaRF02541Crystal structure of the bacterial ribosome from Escherichia coli in complex with gentamicin.X-ray diffraction3.542014-07-09
464V50|1|BBLarge subunit ribosomal RNA23S ribosomal RNAEscherichia coliBacteriaRF02541Crystal Structure of Ribosome with messenger RNA and the Anticodon stem-loop of P-site tRNA.X-ray diffraction3.222014-07-09
474U1V|1|BALarge subunit ribosomal RNA23S rRNAEscherichia coliBacteriaRF02541Crystal structure of the E. coli ribosome bound to linopristin.X-ray diffraction32014-07-30
484YBB|1|CALarge subunit ribosomal RNA23S rRNAEscherichia coliBacteriaRF02541High-resolution structure of the Escherichia coli ribosomeX-ray diffraction2.12015-03-18
495J88|1|CALarge subunit ribosomal RNA23S rRNAEscherichia coliBacteriaRF02541Structure of the E coli 70S ribosome with the U1060A mutation in 16S rRNAX-ray diffraction3.322016-07-06
504V9C|1|DALarge subunit ribosomal RNA23S ribosomal RNAEscherichia coliBacteriaRF02541Allosteric control of the ribosome by small-molecule antibioticsX-ray diffraction3.32014-07-09
514V53|1|BBLarge subunit ribosomal RNA23S rRNAEscherichia coliBacteriaRF02541Crystal structure of the bacterial ribosome from Escherichia coli in complex with gentamicin.X-ray diffraction3.542014-07-09
524V56|1|DBLarge subunit ribosomal RNA23S rRNAEscherichia coliBacteriaRF02541Crystal structure of the bacterial ribosome from Escherichia coli in complex with spectinomycin.X-ray diffraction3.932014-07-09
534U20|1|BALarge subunit ribosomal RNA23S rRNAEscherichia coliBacteriaRF02541Crystal structure of the E. coli ribosome bound to flopristin.X-ray diffraction2.92014-07-30
544V56|1|BBLarge subunit ribosomal RNA23S rRNAEscherichia coliBacteriaRF02541Crystal structure of the bacterial ribosome from Escherichia coli in complex with spectinomycin.X-ray diffraction3.932014-07-09
554U27|1|DALarge subunit ribosomal RNA23S rRNAEscherichia coliBacteriaRF02541Crystal structure of the E. coli ribosome bound to flopristin and linopristin.X-ray diffraction2.82014-07-30
564V55|1|DBLarge subunit ribosomal RNA23S rRNAEscherichia coliBacteriaRF02541Crystal structure of the bacterial ribosome from Escherichia coli in complex with gentamicin and ribosome recycling factor (RRF).X-ray diffraction42014-07-09
574V4Q|1|DBLarge subunit ribosomal RNA23S ribosomal RNAEscherichia coliBacteriaRF02541Crystal structure of the bacterial ribosome from Escherichia coli at 3.5 A resolution.X-ray diffraction3.462014-07-09
584V55|1|BBLarge subunit ribosomal RNA23S rRNAEscherichia coliBacteriaRF02541Crystal structure of the bacterial ribosome from Escherichia coli in complex with gentamicin and ribosome recycling factor (RRF).X-ray diffraction42014-07-09
594V4Q|1|BBLarge subunit ribosomal RNA23S ribosomal RNAEscherichia coliBacteriaRF02541Crystal structure of the bacterial ribosome from Escherichia coli at 3.5 A resolution.X-ray diffraction3.462014-07-09
604V6D|1|BALarge subunit ribosomal RNA23S rRNAEscherichia coliBacteriaRF02541Crystal structure of the E. coli 70S ribosome in an intermediate state of ratchetingX-ray diffraction3.812014-07-09
614U25|1|DALarge subunit ribosomal RNA23S rRNAEscherichia coliBacteriaRF02541Crystal structure of the E. coli ribosome bound to virginiamycin M1.X-ray diffraction2.92014-07-30
624U1U|1|DALarge subunit ribosomal RNA23S rRNAEscherichia coliBacteriaRF02541Crystal structure of the E. coli ribosome bound to quinupristin.X-ray diffraction2.952014-07-30
634V9C|1|BALarge subunit ribosomal RNA23S ribosomal RNAEscherichia coliBacteriaRF02541Allosteric control of the ribosome by small-molecule antibioticsX-ray diffraction3.32014-07-09
644U1V|1|DALarge subunit ribosomal RNA23S rRNAEscherichia coliBacteriaRF02541Crystal structure of the E. coli ribosome bound to linopristin.X-ray diffraction32014-07-30
654V89|1|BALarge subunit ribosomal RNA23S rRNAEscherichia coliBacteriaRF02541Crystal Structure of Release Factor RF3 Trapped in the GTP State on a Rotated Conformation of the Ribosome (without viomycin)X-ray diffraction3.72014-07-09
665IT8|1|CALarge subunit ribosomal RNA23S rRNAEscherichia coliBacteriaRF02541High-resolution structure of the Escherichia coli ribosomeX-ray diffraction3.122016-07-27
674V6E|1|BALarge subunit ribosomal RNA23S rRNAEscherichia coliBacteriaRF02541Crystal structure of the E. coli 70S ribosome in an intermediate state of ratchetingX-ray diffraction3.712014-07-09
684WF1|1|DALarge subunit ribosomal RNA23S rRNAEscherichia coliBacteriaRF02541Crystal structure of the E. coli ribosome bound to negamycin.X-ray diffraction3.092014-11-05
694U24|1|DALarge subunit ribosomal RNA23S rRNAEscherichia coliBacteriaRF02541Crystal structure of the E. coli ribosome bound to dalfopristin.X-ray diffraction2.92014-07-30
704U26|1|DALarge subunit ribosomal RNA23S rRNAEscherichia coliBacteriaRF02541Crystal structure of the E. coli ribosome bound to dalfopristin and quinupristin.X-ray diffraction2.82014-07-30
714U20|1|DALarge subunit ribosomal RNA23S rRNAEscherichia coliBacteriaRF02541Crystal structure of the E. coli ribosome bound to flopristin.X-ray diffraction2.92014-07-30
725J91|1|CALarge subunit ribosomal RNA23S rRNAEscherichia coliBacteriaRF02541Structure of the Wild-type 70S E coli ribosome bound to TigecyclineX-ray diffraction2.962016-07-06
734V6C|1|DALarge subunit ribosomal RNA23S rRNAEscherichia coliBacteriaRF02541Crystal structure of the E. coli 70S ribosome in an intermediate state of ratchetingX-ray diffraction3.192014-07-09
744WWW|1|YALarge subunit ribosomal RNA23S rRNAEscherichia coliBacteriaRF02541Crystal structure of the E. coli ribosome bound to CEM-101X-ray diffraction3.12014-12-24
754V7T|1|DALarge subunit ribosomal RNA23S rRNAEscherichia coliBacteriaRF02541Crystal structure of the E. coli ribosome bound to chloramphenicol.X-ray diffraction3.192014-07-09
764V6D|1|DALarge subunit ribosomal RNA23S rRNAEscherichia coliBacteriaRF02541Crystal structure of the E. coli 70S ribosome in an intermediate state of ratchetingX-ray diffraction3.812014-07-09
774V7V|1|DALarge subunit ribosomal RNA23S rRNAEscherichia coliBacteriaRF02541Crystal structure of the E. coli ribosome bound to clindamycin.X-ray diffraction3.292014-07-09
784V7S|1|DALarge subunit ribosomal RNA23S rRNAEscherichia coliBacteriaRF02541Crystal structure of the E. coli ribosome bound to telithromycin.X-ray diffraction3.252014-07-09
794V7U|1|DALarge subunit ribosomal RNA23S rRNAEscherichia coliBacteriaRF02541Crystal structure of the E. coli ribosome bound to erythromycin.X-ray diffraction3.12014-07-09
804V6E|1|DALarge subunit ribosomal RNA23S rRNAEscherichia coliBacteriaRF02541Crystal structure of the E. coli 70S ribosome in an intermediate state of ratchetingX-ray diffraction3.712014-07-09
814V5B|1|CBLarge subunit ribosomal RNA23S RIBOSOMAL RNAEscherichia coliBacteriaRF02541Structure of PDF binding helix in complex with the ribosomeX-ray diffraction3.742014-07-09
824V5B|1|ABLarge subunit ribosomal RNA23S RIBOSOMAL RNAEscherichia coliBacteriaRF02541Structure of PDF binding helix in complex with the ribosomeX-ray diffraction3.742014-07-09
835J5B|1|DALarge subunit ribosomal RNA23S rRNAEscherichia coliBacteriaRF02541Structure of the WT E coli ribosome bound to tetracyclineX-ray diffraction2.82016-07-27
844V4H|1|DBLarge subunit ribosomal RNA23S RIBOSOMAL RNAEscherichia coliBacteriaRF02541Crystal structure of the bacterial ribosome from Escherichia coli in complex with the antibiotic kasugamyin at 3.5A resolution.X-ray diffraction3.462014-07-09
854V4H|1|BBLarge subunit ribosomal RNA23S RIBOSOMAL RNAEscherichia coliBacteriaRF02541Crystal structure of the bacterial ribosome from Escherichia coli in complex with the antibiotic kasugamyin at 3.5A resolution.X-ray diffraction3.462014-07-09
865J5B|1|CALarge subunit ribosomal RNA23S rRNAEscherichia coliBacteriaRF02541Structure of the WT E coli ribosome bound to tetracyclineX-ray diffraction2.82016-07-27
875AFI|1|ALarge subunit ribosomal RNA23S ribosomal RNAEscherichia coliBacteriaRF025412.9A Structure of E. coli ribosome-EF-TU complex by cs-corrected cryo-EMElectron microscopy2.92015-03-11
885H5U|1|ALarge subunit ribosomal RNA23S rRNAEscherichia coliBacteriaRF02541Mechanistic insights into the alternative translation termination by ArfA and RF2Electron microscopy3.012017-01-25
895MDV|1|1Large subunit ribosomal RNA23S ribosomal RNAEscherichia coliBacteriaRF02541Structure of ArfA and RF2 bound to the 70S ribosome (accommodated state)Electron microscopy2.972016-12-14
905MDW|1|1Large subunit ribosomal RNA23S ribosomal RNAEscherichia coliBacteriaRF02541Structure of ArfA(A18T) and RF2 bound to the 70S ribosome (pre-accommodated state)Electron microscopy3.062016-12-14
915MGP|1|ALarge subunit ribosomal RNA23S ribosomal RNAEscherichia coliBacteriaRF02541Structural basis for ArfA-RF2 mediated translation termination on stop-codon lacking mRNAsElectron microscopy3.12016-12-14
925U9G|1|01Large subunit ribosomal RNA23S ribosomal RNAEscherichia coliBacteriaRF025413.2 A cryo-EM ArfA-RF2 ribosome rescue complex (Structure I)Electron microscopy3.22017-03-22
935U9F|1|01Large subunit ribosomal RNA23S ribosomal RNAEscherichia coliBacteriaRF025413.2 A cryo-EM ArfA-RF2 ribosome rescue complex (Structure II)Electron microscopy3.22017-03-22
945MDZ|1|1Large subunit ribosomal RNA23S ribosomal RNAEscherichia coliBacteriaRF02541Structure of the 70S ribosome (empty A site)Electron microscopy3.12016-12-14
953JBV|1|bLarge subunit ribosomal RNARNA (2903-MER)Escherichia coliBacteriaRF02541Mechanisms of Ribosome Stalling by SecM at Multiple Elongation StepsElectron microscopy3.322016-01-27
965GAE|1|ALarge subunit ribosomal RNA23S rRNA, tRNA CCA end (5'-R(P*CP*CP*A)-3')Escherichia coliBacteriaRF02541RNC in complex with a translocating SecYEGElectron microscopy3.332016-01-27
973JCE|1|ALarge subunit ribosomal RNA23 ribosomal RNAEscherichia coliBacteriaRF02541Structure of Escherichia coli EF4 in pretranslocational ribosomes (Pre EF4)Electron microscopy3.22016-01-13
985LZD|1|ALarge subunit ribosomal RNA23S ribosomal RNAEscherichia coliBacteriaRF02541Structure of SelB-Sec-tRNASec bound to the 70S ribosome in the GTPase activated state (GA)Electron microscopy3.42016-11-23
995MDY|1|1Large subunit ribosomal RNA23S ribosomal RNAEscherichia coliBacteriaRF02541Structure of ArfA and TtRF2 bound to the 70S ribosome (pre-accommodated state)Electron microscopy3.352016-12-21
1005LZE|1|ALarge subunit ribosomal RNA23S ribosomal RNAEscherichia coliBacteriaRF02541Structure of the 70S ribosome with Sec-tRNASec in the classical pre-translocation state (C)Electron microscopy3.52016-11-23
1015U4I|1|ALarge subunit ribosomal RNA23S rRNAEscherichia coliBacteriaRF02541Structural Basis of Co-translational Quality Control by ArfA and RF2 Bound to RibosomeElectron microscopy3.52017-01-11
1025IQR|1|1Large subunit ribosomal RNALSU rRNAEscherichia coliBacteriaRF02541Structure of RelA bound to the 70S ribosomeElectron microscopy32016-05-04
1033JBU|1|bLarge subunit ribosomal RNA23S rRNAEscherichia coliBacteriaRF02541Mechanisms of Ribosome Stalling by SecM at Multiple Elongation StepsElectron microscopy3.642016-01-27
1045KCR|1|1ALarge subunit ribosomal RNA23S Ribosomal RNAEscherichia coliBacteriaRF02541Cryo-EM structure of the Escherichia coli 70S ribosome in complex with antibiotic Avilamycin C, mRNA and P-site tRNA at 3.6A resolutionElectron microscopy3.62016-08-17
1055LZA|1|ALarge subunit ribosomal RNA23S ribosomal RNAEscherichia coliBacteriaRF02541Structure of the 70S ribosome with SECIS-mRNA and P-site tRNA (Initial complex, IC)Electron microscopy3.62016-11-23
1065JU8|1|BALarge subunit ribosomal RNA23S ribosomal RNAEscherichia coliBacteriaRF02541Cryo-EM structure of an ErmBL-stalled ribosome in complex with P-, and E-tRNAElectron microscopy3.62016-07-20
1075JTE|1|BALarge subunit ribosomal RNA23S ribosomal RNAEscherichia coliBacteriaRF02541Cryo-EM structure of an ErmBL-stalled ribosome in complex with A-, P-, and E-tRNAElectron microscopy3.62016-07-20
1083J9Z|1|LALarge subunit ribosomal RNA23S ribosomal RNAEscherichia coliBacteriaRF02541Activation of GTP Hydrolysis in mRNA-tRNA Translocation by Elongation Factor GElectron microscopy3.62015-07-01
1093JCJ|1|ALarge subunit ribosomal RNA23S ribosomal RNAEscherichia coliBacteriaRF02541Structures of ribosome-bound initiation factor 2 reveal the mechanism of subunit associationElectron microscopy3.72016-03-09
1105L3P|1|ALarge subunit ribosomal RNA23S ribosomal RNAEscherichia coliBacteriaRF02541Cryo-EM structure of stringent response factor RelA bound to ErmCL-stalled ribosome complexElectron microscopy3.72016-07-20
1115GAD|1|ALarge subunit ribosomal RNA23S rRNA, tRNA CCAendEscherichia coliBacteriaRF02541RNC-SRP-SR complex early stateElectron microscopy3.72016-01-27
1125KPW|1|27Large subunit ribosomal RNA23S ribosomal RNAEscherichia coliBacteriaRF02541Structure of RelA bound to ribosome in presence of A/R tRNA (Structure III)Electron microscopy3.92016-09-28
1135GAG|1|ALarge subunit ribosomal RNA23S rRNA, tRNA CCAendEscherichia coliBacteriaRF02541RNC in complex with SRP-SR in the closed stateElectron microscopy3.82016-01-27
1145GAH|1|ALarge subunit ribosomal RNA23S rRNA, tRNA CCAendEscherichia coliBacteriaRF02541RNC in complex with SRP with detached NG domainElectron microscopy3.82016-01-27
1155KPS|1|28Large subunit ribosomal RNA23S ribosomal RNAEscherichia coliBacteriaRF02541Structure of RelA bound to ribosome in absence of A/R tRNA (Structure I)Electron microscopy3.92016-09-28
1163J9Y|1|ALarge subunit ribosomal RNA23S ribosomal RNAEscherichia coliBacteriaRF02541Cryo-EM structure of tetracycline resistance protein TetM bound to a translating E.coli ribosomeElectron microscopy3.92015-04-15
1175KPX|1|27Large subunit ribosomal RNA23S ribosomal RNAEscherichia coliBacteriaRF02541Structure of RelA bound to ribosome in presence of A/R tRNA (Structure IV)Electron microscopy3.92016-09-28
1183JCD|1|ALarge subunit ribosomal RNA23S ribosomal RNAEscherichia coliBacteriaRF02541Structure of Escherichia coli EF4 in posttranslocational ribosomes (Post EF4)Electron microscopy3.72016-01-13
1194UY8|1|ALarge subunit ribosomal RNARRNA-23S RIBOSOMAL RNAEscherichia coliBacteriaRF02541Molecular basis for the ribosome functioning as a L-tryptophan sensor - Cryo-EM structure of a TnaC stalled E.coli ribosomeElectron microscopy3.82014-10-29
1205KCS|1|1ALarge subunit ribosomal RNA23S Ribosomal RNAEscherichia coliBacteriaRF02541Cryo-EM structure of the Escherichia coli 70S ribosome in complex with antibiotic Evernimycin, mRNA, TetM and P-site tRNA at 3.9A resolutionElectron microscopy3.92016-08-17
1213J7Z|1|ALarge subunit ribosomal RNA23S rRNA, P-tRNA CCA-endEscherichia coliBacteriaRF02541Structure of the E. coli 50S subunit with ErmCL nascent chainElectron microscopy3.92014-10-22
1223JA1|1|LALarge subunit ribosomal RNA23S ribosomal RNAEscherichia coliBacteriaRF02541Activation of GTP Hydrolysis in mRNA-tRNA Translocation by Elongation Factor GElectron microscopy3.62015-07-01
1235U4J|1|ALarge subunit ribosomal RNA23S rRNAEscherichia coliBacteriaRF02541Structural Basis of Co-translational Quality Control by ArfA and RF2 Bound to RibosomeElectron microscopy3.72017-01-11

Heat map of mutual geometric discrepancy, in Angstroms per nucleotide. Instances are ordered to put similar structures near each other. The colorbar ranges from 0 to the maximum observed discrepancy, up to 0.5

#S - ordering by similarity (same as in the heat map).
#SPDBTitleMethodResolutionLengthNAKB_NA_annotationNAKB_protein_annotation
14V9D|1|CATitle: Structures of the bacterial ribosome in classical and hybrid states of tRNA bindingX-RAY DIFFRACTION32897
24U24|1|BATitle: Crystal structure of the E. coli ribosome bound to dalfopristin.X-RAY DIFFRACTION2.92897
34U26|1|BATitle: Crystal structure of the E. coli ribosome bound to dalfopristin and quinupristin.X-RAY DIFFRACTION2.82897
44U25|1|BATitle: Crystal structure of the E. coli ribosome bound to virginiamycin M1.X-RAY DIFFRACTION2.92897
54U27|1|BATitle: Crystal structure of the E. coli ribosome bound to flopristin and linopristin.X-RAY DIFFRACTION2.82897
64WF1|1|BATitle: Crystal structure of the E. coli ribosome bound to negamycin.X-RAY DIFFRACTION3.092897
74U1V|1|BATitle: Crystal structure of the E. coli ribosome bound to linopristin.X-RAY DIFFRACTION32897
84U20|1|BATitle: Crystal structure of the E. coli ribosome bound to flopristin.X-RAY DIFFRACTION2.92897
94U1U|1|BATitle: Crystal structure of the E. coli ribosome bound to quinupristin.X-RAY DIFFRACTION2.952897
104V9C|1|DATitle: Allosteric control of the ribosome by small-molecule antibioticsX-RAY DIFFRACTION3.32897
114WOI|1|BATitle: 4,5-linked aminoglycoside antibiotics regulate the bacterial ribosome by targeting dynamic conformational processes within intersubunit bridge B2X-RAY DIFFRACTION32897
123JA1|1|LATitle: Activation of GTP Hydrolysis in mRNA-tRNA Translocation by Elongation Factor GELECTRON MICROSCOPY3.62904
133JBV|1|bTitle: Mechanisms of Ribosome Stalling by SecM at Multiple Elongation StepsELECTRON MICROSCOPY3.322903
143JBU|1|bTitle: Mechanisms of Ribosome Stalling by SecM at Multiple Elongation StepsELECTRON MICROSCOPY3.642903
155GAE|1|ATitle: RNC in complex with a translocating SecYEGELECTRON MICROSCOPY3.332884
164V5B|1|CBTitle: Structure of PDF binding helix in complex with the ribosomeX-RAY DIFFRACTION3.742841
174V4Q|1|DBTitle: Crystal structure of the bacterial ribosome from Escherichia coli at 3.5 A resolution.X-RAY DIFFRACTION3.462841
184V4H|1|DBTitle: Crystal structure of the bacterial ribosome from Escherichia coli in complex with the antibiotic kasugamyin at 3.5A resolution.X-RAY DIFFRACTION3.462841
194V64|1|DBTitle: Crystal structure of the bacterial ribosome from Escherichia coli in complex with hygromycin B.X-RAY DIFFRACTION3.52841
204V54|1|DBTitle: Crystal structure of the bacterial ribosome from Escherichia coli in complex with ribosome recycling factor (RRF).X-RAY DIFFRACTION3.32841
214V55|1|DBTitle: Crystal structure of the bacterial ribosome from Escherichia coli in complex with gentamicin and ribosome recycling factor (RRF).X-RAY DIFFRACTION42841
224V53|1|DBTitle: Crystal structure of the bacterial ribosome from Escherichia coli in complex with gentamicin.X-RAY DIFFRACTION3.542841
234V52|1|DBTitle: Crystal structure of the bacterial ribosome from Escherichia coli in complex with neomycin.X-RAY DIFFRACTION3.212841
244V57|1|DBTitle: Crystal structure of the bacterial ribosome from Escherichia coli in complex with spectinomycin and neomycin.X-RAY DIFFRACTION3.52841
254V56|1|DBTitle: Crystal structure of the bacterial ribosome from Escherichia coli in complex with spectinomycin.X-RAY DIFFRACTION3.932841
264V50|1|DBTitle: Crystal Structure of Ribosome with messenger RNA and the Anticodon stem-loop of P-site tRNA.X-RAY DIFFRACTION3.222841
275J88|1|DATitle: Structure of the E coli 70S ribosome with the U1060A mutation in 16S rRNAX-RAY DIFFRACTION3.322886
285IT8|1|DATitle: High-resolution structure of the Escherichia coli ribosomeX-RAY DIFFRACTION3.122886
295JC9|1|DATitle: Structure of the Escherichia coli ribosome with the U1052G mutation in the 16S rRNAX-RAY DIFFRACTION3.032886
305J7L|1|DATitle: Structure of the 70S E coli ribosome with the U1052G mutation in the 16S rRNA bound to tetracyclineX-RAY DIFFRACTION32886
315J8A|1|DATitle: Structure of the E coli 70S ribosome with the U1052G mutation in 16S rRNA bound to tigecyclineX-RAY DIFFRACTION3.12886
325J91|1|DATitle: Structure of the Wild-type 70S E coli ribosome bound to TigecyclineX-RAY DIFFRACTION2.962886
335J5B|1|DATitle: Structure of the WT E coli ribosome bound to tetracyclineX-RAY DIFFRACTION2.82886
344YBB|1|DATitle: High-resolution structure of the Escherichia coli ribosomeX-RAY DIFFRACTION2.12883
355KCR|1|1ATitle: Cryo-EM structure of the Escherichia coli 70S ribosome in complex with antibiotic Avilamycin C, mRNA and P-site tRNA at 3.6A resolutionELECTRON MICROSCOPY3.62883
364V6E|1|BATitle: Crystal structure of the E. coli 70S ribosome in an intermediate state of ratchetingX-RAY DIFFRACTION3.712854
374V6D|1|BATitle: Crystal structure of the E. coli 70S ribosome in an intermediate state of ratchetingX-RAY DIFFRACTION3.812854
384V7V|1|BATitle: Crystal structure of the E. coli ribosome bound to clindamycin.X-RAY DIFFRACTION3.292854
394V7T|1|BATitle: Crystal structure of the E. coli ribosome bound to chloramphenicol.X-RAY DIFFRACTION3.192854
404V7S|1|BATitle: Crystal structure of the E. coli ribosome bound to telithromycin.X-RAY DIFFRACTION3.252854
414WWW|1|RATitle: Crystal structure of the E. coli ribosome bound to CEM-101X-RAY DIFFRACTION3.12854
424V6C|1|BATitle: Crystal structure of the E. coli 70S ribosome in an intermediate state of ratchetingX-RAY DIFFRACTION3.192854
434V7U|1|BATitle: Crystal structure of the E. coli ribosome bound to erythromycin.X-RAY DIFFRACTION3.12854
444V89|1|BATitle: Crystal Structure of Release Factor RF3 Trapped in the GTP State on a Rotated Conformation of the Ribosome (without viomycin)X-RAY DIFFRACTION3.72853
454V85|1|BATitle: Crystal Structure of Release Factor RF3 Trapped in the GTP State on a Rotated Conformation of the Ribosome.X-RAY DIFFRACTION3.22853
464V9P|1|EATitle: Control of ribosomal subunit rotation by elongation factor GX-RAY DIFFRACTION2.92854
474V9O|1|EATitle: Control of ribosomal subunit rotation by elongation factor GX-RAY DIFFRACTION2.92854
484V9O|1|GATitle: Control of ribosomal subunit rotation by elongation factor GX-RAY DIFFRACTION2.92854
494V9P|1|GATitle: Control of ribosomal subunit rotation by elongation factor GX-RAY DIFFRACTION2.92854
504V9P|1|CATitle: Control of ribosomal subunit rotation by elongation factor GX-RAY DIFFRACTION2.92854
514V9O|1|CATitle: Control of ribosomal subunit rotation by elongation factor GX-RAY DIFFRACTION2.92854
523JCJ|1|ATitle: Structures of ribosome-bound initiation factor 2 reveal the mechanism of subunit associationELECTRON MICROSCOPY3.72854
533J7Z|1|ATitle: Structure of the E. coli 50S subunit with ErmCL nascent chainELECTRON MICROSCOPY3.92854
544UY8|1|ATitle: Molecular basis for the ribosome functioning as a L-tryptophan sensor - Cryo-EM structure of a TnaC stalled E.coli ribosomeELECTRON MICROSCOPY3.82854
554V9O|1|AATitle: Control of ribosomal subunit rotation by elongation factor GX-RAY DIFFRACTION2.92854
564V9P|1|AATitle: Control of ribosomal subunit rotation by elongation factor GX-RAY DIFFRACTION2.92854
574WOI|1|CATitle: 4,5-linked aminoglycoside antibiotics regulate the bacterial ribosome by targeting dynamic conformational processes within intersubunit bridge B2X-RAY DIFFRACTION32897
584V9C|1|BATitle: Allosteric control of the ribosome by small-molecule antibioticsX-RAY DIFFRACTION3.32897
594V9D|1|DATitle: Structures of the bacterial ribosome in classical and hybrid states of tRNA bindingX-RAY DIFFRACTION32896
604U1U|1|DATitle: Crystal structure of the E. coli ribosome bound to quinupristin.X-RAY DIFFRACTION2.952897
614U20|1|DATitle: Crystal structure of the E. coli ribosome bound to flopristin.X-RAY DIFFRACTION2.92897
624U1V|1|DATitle: Crystal structure of the E. coli ribosome bound to linopristin.X-RAY DIFFRACTION32897
634WF1|1|DATitle: Crystal structure of the E. coli ribosome bound to negamycin.X-RAY DIFFRACTION3.092897
644U27|1|DATitle: Crystal structure of the E. coli ribosome bound to flopristin and linopristin.X-RAY DIFFRACTION2.82897
654U25|1|DATitle: Crystal structure of the E. coli ribosome bound to virginiamycin M1.X-RAY DIFFRACTION2.92897
664U26|1|DATitle: Crystal structure of the E. coli ribosome bound to dalfopristin and quinupristin.X-RAY DIFFRACTION2.82897
674U24|1|DATitle: Crystal structure of the E. coli ribosome bound to dalfopristin.X-RAY DIFFRACTION2.92897
684YBB|1|CATitle: High-resolution structure of the Escherichia coli ribosomeX-RAY DIFFRACTION2.12876
695JC9|1|CATitle: Structure of the Escherichia coli ribosome with the U1052G mutation in the 16S rRNAX-RAY DIFFRACTION3.032876
705J5B|1|CATitle: Structure of the WT E coli ribosome bound to tetracyclineX-RAY DIFFRACTION2.82876
715J91|1|CATitle: Structure of the Wild-type 70S E coli ribosome bound to TigecyclineX-RAY DIFFRACTION2.962876
725J7L|1|CATitle: Structure of the 70S E coli ribosome with the U1052G mutation in the 16S rRNA bound to tetracyclineX-RAY DIFFRACTION32875
735J8A|1|CATitle: Structure of the E coli 70S ribosome with the U1052G mutation in 16S rRNA bound to tigecyclineX-RAY DIFFRACTION3.12876
745IT8|1|CATitle: High-resolution structure of the Escherichia coli ribosomeX-RAY DIFFRACTION3.122876
755J88|1|CATitle: Structure of the E coli 70S ribosome with the U1060A mutation in 16S rRNAX-RAY DIFFRACTION3.322876
764V7U|1|DATitle: Crystal structure of the E. coli ribosome bound to erythromycin.X-RAY DIFFRACTION3.12841
774WWW|1|YATitle: Crystal structure of the E. coli ribosome bound to CEM-101X-RAY DIFFRACTION3.12841
784V7S|1|DATitle: Crystal structure of the E. coli ribosome bound to telithromycin.X-RAY DIFFRACTION3.252841
794V7V|1|DATitle: Crystal structure of the E. coli ribosome bound to clindamycin.X-RAY DIFFRACTION3.292841
804V7T|1|DATitle: Crystal structure of the E. coli ribosome bound to chloramphenicol.X-RAY DIFFRACTION3.192841
814V6C|1|DATitle: Crystal structure of the E. coli 70S ribosome in an intermediate state of ratchetingX-RAY DIFFRACTION3.192841
824V6E|1|DATitle: Crystal structure of the E. coli 70S ribosome in an intermediate state of ratchetingX-RAY DIFFRACTION3.712841
834V6D|1|DATitle: Crystal structure of the E. coli 70S ribosome in an intermediate state of ratchetingX-RAY DIFFRACTION3.812841
844V50|1|BBTitle: Crystal Structure of Ribosome with messenger RNA and the Anticodon stem-loop of P-site tRNA.X-RAY DIFFRACTION3.222841
854V54|1|BBTitle: Crystal structure of the bacterial ribosome from Escherichia coli in complex with ribosome recycling factor (RRF).X-RAY DIFFRACTION3.32841
864V56|1|BBTitle: Crystal structure of the bacterial ribosome from Escherichia coli in complex with spectinomycin.X-RAY DIFFRACTION3.932841
874V57|1|BBTitle: Crystal structure of the bacterial ribosome from Escherichia coli in complex with spectinomycin and neomycin.X-RAY DIFFRACTION3.52841
884V55|1|BBTitle: Crystal structure of the bacterial ribosome from Escherichia coli in complex with gentamicin and ribosome recycling factor (RRF).X-RAY DIFFRACTION42841
894V53|1|BBTitle: Crystal structure of the bacterial ribosome from Escherichia coli in complex with gentamicin.X-RAY DIFFRACTION3.542841
904V52|1|BBTitle: Crystal structure of the bacterial ribosome from Escherichia coli in complex with neomycin.X-RAY DIFFRACTION3.212841
914V64|1|BBTitle: Crystal structure of the bacterial ribosome from Escherichia coli in complex with hygromycin B.X-RAY DIFFRACTION3.52841
924V4H|1|BBTitle: Crystal structure of the bacterial ribosome from Escherichia coli in complex with the antibiotic kasugamyin at 3.5A resolution.X-RAY DIFFRACTION3.462841
934V4Q|1|BBTitle: Crystal structure of the bacterial ribosome from Escherichia coli at 3.5 A resolution.X-RAY DIFFRACTION3.462841
944V5B|1|ABTitle: Structure of PDF binding helix in complex with the ribosomeX-RAY DIFFRACTION3.742841
953J9Z|1|LATitle: Activation of GTP Hydrolysis in mRNA-tRNA Translocation by Elongation Factor GELECTRON MICROSCOPY3.62904
963JCD|1|ATitle: Structure of Escherichia coli EF4 in posttranslocational ribosomes (Post EF4)ELECTRON MICROSCOPY3.72903
973JCE|1|ATitle: Structure of Escherichia coli EF4 in pretranslocational ribosomes (Pre EF4)ELECTRON MICROSCOPY3.22903
985H5U|1|ATitle: Mechanistic insights into the alternative translation termination by ArfA and RF2ELECTRON MICROSCOPY3.012902
995GAG|1|ATitle: RNC in complex with SRP-SR in the closed stateELECTRON MICROSCOPY3.82883
1005GAH|1|ATitle: RNC in complex with SRP with detached NG domainELECTRON MICROSCOPY3.82883
1015GAD|1|ATitle: RNC-SRP-SR complex early stateELECTRON MICROSCOPY3.72883
1025L3P|1|ATitle: Cryo-EM structure of stringent response factor RelA bound to ErmCL-stalled ribosome complexELECTRON MICROSCOPY3.72866
1035LZA|1|ATitle: Structure of the 70S ribosome with SECIS-mRNA and P-site tRNA (Initial complex, IC)ELECTRON MICROSCOPY3.62877
1045LZE|1|ATitle: Structure of the 70S ribosome with Sec-tRNASec in the classical pre-translocation state (C)ELECTRON MICROSCOPY3.52876
1055LZD|1|ATitle: Structure of SelB-Sec-tRNASec bound to the 70S ribosome in the GTPase activated state (GA)ELECTRON MICROSCOPY3.42879
1065U9G|1|01Title: 3.2 A cryo-EM ArfA-RF2 ribosome rescue complex (Structure I)ELECTRON MICROSCOPY3.22903
1075U9F|1|01Title: 3.2 A cryo-EM ArfA-RF2 ribosome rescue complex (Structure II)ELECTRON MICROSCOPY3.22903
1085MGP|1|ATitle: Structural basis for ArfA-RF2 mediated translation termination on stop-codon lacking mRNAsELECTRON MICROSCOPY3.12900
1095KCS|1|1ATitle: Cryo-EM structure of the Escherichia coli 70S ribosome in complex with antibiotic Evernimycin, mRNA, TetM and P-site tRNA at 3.9A resolutionELECTRON MICROSCOPY3.92876
1103J9Y|1|ATitle: Cryo-EM structure of tetracycline resistance protein TetM bound to a translating E.coli ribosomeELECTRON MICROSCOPY3.92876
1115AFI|1|ATitle: 2.9A Structure of E. coli ribosome-EF-TU complex by cs-corrected cryo-EMELECTRON MICROSCOPY2.92876
1125KPX|1|27Title: Structure of RelA bound to ribosome in presence of A/R tRNA (Structure IV)ELECTRON MICROSCOPY3.92903
1135KPS|1|28Title: Structure of RelA bound to ribosome in absence of A/R tRNA (Structure I)ELECTRON MICROSCOPY3.92903
1145KPW|1|27Title: Structure of RelA bound to ribosome in presence of A/R tRNA (Structure III)ELECTRON MICROSCOPY3.92903
1155JTE|1|BATitle: Cryo-EM structure of an ErmBL-stalled ribosome in complex with A-, P-, and E-tRNAELECTRON MICROSCOPY3.62897
1165JU8|1|BATitle: Cryo-EM structure of an ErmBL-stalled ribosome in complex with P-, and E-tRNAELECTRON MICROSCOPY3.62897
1175MDY|1|1Title: Structure of ArfA and TtRF2 bound to the 70S ribosome (pre-accommodated state)ELECTRON MICROSCOPY3.352881
1185MDW|1|1Title: Structure of ArfA(A18T) and RF2 bound to the 70S ribosome (pre-accommodated state)ELECTRON MICROSCOPY3.062881
1195MDZ|1|1Title: Structure of the 70S ribosome (empty A site)ELECTRON MICROSCOPY3.12881
1205MDV|1|1Title: Structure of ArfA and RF2 bound to the 70S ribosome (accommodated state)ELECTRON MICROSCOPY2.972881
1215IQR|1|1Title: Structure of RelA bound to the 70S ribosomeELECTRON MICROSCOPY32882
1225U4I|1|ATitle: Structural Basis of Co-translational Quality Control by ArfA and RF2 Bound to RibosomeELECTRON MICROSCOPY3.52887
1235U4J|1|ATitle: Structural Basis of Co-translational Quality Control by ArfA and RF2 Bound to RibosomeELECTRON MICROSCOPY3.79

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