Equivalence class NR_4.0_41601.1 Obsolete
| # | IFE | Standardized name | Molecule | Organism | Source | Rfam | Title | Method | Res. Å | Date |
|---|---|---|---|---|---|---|---|---|---|---|
| 1 | 4MCF|1|H+ 4MCF|1|G (rep) | Gas5 GREM Rev, Gas5 GREM Fwd | Homo sapiens | Eukarya | Crystal structure of the Gas5 GRE Mimic | X-ray diffraction | 1.9 | 2014-11-12 | ||
| 2 | 4MCF|1|F+ 4MCF|1|E | Gas5 GREM Rev, Gas5 GREM Fwd | Homo sapiens | Eukarya | Crystal structure of the Gas5 GRE Mimic | X-ray diffraction | 1.9 | 2014-11-12 | ||
| 3 | 4MCF|1|B+ 4MCF|1|D+ 4MCF|1|C+ 4MCF|1|A | Gas5 GREM Rev, Gas5 GREM Fwd | Homo sapiens | Eukarya | Crystal structure of the Gas5 GRE Mimic | X-ray diffraction | 1.9 | 2014-11-12 |
Release history
| Release | 6.0 |
|---|---|
| Date | 2017-04-04 |
Parents
| This class | Parent classes | Release id | Intersection | Added to this class | Only in parent |
|---|---|---|---|---|---|
| NR_4.0_41601.1 | NR_4.0_32433.1 | 6.0 | (3) 4MCF|1|H+4MCF|1|G, 4MCF|1|B+4MCF|1|D+4MCF|1|C+4MCF|1|A, 4MCF|1|F+4MCF|1|E | (0) | (2) 4MCE|1|D+4MCE|1|C, 4MCE|1|B+4MCE|1|A |
Children
| This class | Descendant classes | Release id | Intersection | Only in this class | Added to child |
|---|---|---|---|---|---|
| NR_4.0_41601.1 | NR_4.0_08302.1 | 7.0 | (3) 4MCF|1|H+4MCF|1|G, 4MCF|1|F+4MCF|1|E, 4MCF|1|B+4MCF|1|D+4MCF|1|C+4MCF|1|A | (0) | (2) 4MCE|1|D+4MCE|1|C, 4MCE|1|B+4MCE|1|A |
Heat map of mutual geometric discrepancy, in Angstroms per nucleotide. Instances are ordered to put similar structures near each other. The colorbar ranges from 0 to the maximum observed discrepancy, up to 0.5
#S - ordering by similarity (same as in the heat map).| #S | PDB | Title | Method | Resolution | Length | NAKB_NA_annotation | NAKB_protein_annotation |
|---|---|---|---|---|---|---|---|
| 1 | 4MCF|1|H+4MCF|1|G | Title: Crystal structure of the Gas5 GRE Mimic | X-RAY DIFFRACTION | 1.9 | 10 | ||
| 2 | 4MCF|1|F+4MCF|1|E | Title: Crystal structure of the Gas5 GRE Mimic | X-RAY DIFFRACTION | 1.9 | 10 | ||
| 3 | 4MCF|1|B+4MCF|1|D+4MCF|1|C+4MCF|1|A | Title: Crystal structure of the Gas5 GRE Mimic | X-RAY DIFFRACTION | 1.9 | 11 |
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