Equivalence class NR_4.0_39668.1 Obsolete
| # | IFE | Standardized name | Molecule | Organism | Source | Rfam | Title | Method | Res. Å | Date |
|---|---|---|---|---|---|---|---|---|---|---|
| 1 | 4GV9|1|F+ 4GV9|1|E (rep) | RNA (5'-R(P*CP*GP*CP*CP*C)-3'), RNA (5'-R(*(GTP)P*GP*GP*C)-3') | Lassa nucleoprotein C-terminal domain in complex with triphosphated dsRNA soaking for 5 min | X-ray diffraction | 2.46 | 2013-05-01 | ||||
| 2 | 4GV3|1|C+ 4GV3|1|B | RNA (5'-R(P*CP*GP*CP*CP*C)-3'), RNA (5'-R(*(GTP)P*GP*GP*C)-3') | Structures of Lassa and Tacaribe viral nucleoproteins with or without 5 triphosphate dsRNA substrate reveal a unique 3 -5 exoribonuclease mechanism to suppress type I interferon production | X-ray diffraction | 1.68 | 2013-05-01 | ||||
| 3 | 4GV6|1|C+ 4GV6|1|B | RNA (5'-R(P*CP*GP*CP*CP*C)-3'), RNA (5'-R(*(GTP)P*GP*GP*C)-3') | Structures of Lassa and Tacaribe viral nucleoproteins with or without 5 triphosphate dsRNA substrate reveal a unique 3 -5 exoribonuclease mechanism to suppress type I interferon production | X-ray diffraction | 1.98 | 2013-05-01 |
Parents
| This class | Parent classes | Release id | Intersection | Added to this class | Only in parent |
|---|
Children
| This class | Descendant classes | Release id | Intersection | Only in this class | Added to child |
|---|---|---|---|---|---|
| NR_4.0_39668.1 | NR_4.0_20265.1 | 6.0 | (1) 4GV9|1|F+4GV9|1|E | (2) 4GV3|1|C+4GV3|1|B, 4GV6|1|C+4GV6|1|B | (0) |
Heat map of mutual geometric discrepancy, in Angstroms per nucleotide. Instances are ordered to put similar structures near each other. The colorbar ranges from 0 to the maximum observed discrepancy, up to 0.5
#S - ordering by similarity (same as in the heat map).| #S | PDB | Title | Method | Resolution | Length | NAKB_NA_annotation | NAKB_protein_annotation |
|---|---|---|---|---|---|---|---|
| 1 | 4GV6|1|C+4GV6|1|B | Title: Structures of Lassa and Tacaribe viral nucleoproteins with or without 5 triphosphate dsRNA substrate reveal a unique 3 -5 exoribonuclease mechanism to suppress type I interferon production | X-RAY DIFFRACTION | 1.98 | 4 | ||
| 2 | 4GV9|1|F+4GV9|1|E | Title: Lassa nucleoprotein C-terminal domain in complex with triphosphated dsRNA soaking for 5 min | X-RAY DIFFRACTION | 2.46 | 5 | ||
| 3 | 4GV3|1|C+4GV3|1|B | Title: Structures of Lassa and Tacaribe viral nucleoproteins with or without 5 triphosphate dsRNA substrate reveal a unique 3 -5 exoribonuclease mechanism to suppress type I interferon production | X-RAY DIFFRACTION | 1.68 | 4 |
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