Equivalence class NR_4.0_32909.1 Obsolete
| # | IFE | Standardized name | Molecule | Organism | Source | Rfam | Title | Method | Res. Å | Date |
|---|---|---|---|---|---|---|---|---|---|---|
| 1 | 4V7M|1|CW (rep) | Transfer RNA | tRNA-Gln, RNA (5'-R(*AP*AP*AP*AP*AP*GP*GP*AP*AP*AP*UP*A*AP*AP*AP*AP*UP*GP*CP*AP*GP*UP*UP*CP*AP*AP*UP*CP*UP*A)-3') | Escherichia coli | Bacteria | RF00005 | The structures of Capreomycin bound to the 70S ribosome. | X-ray diffraction | 3.45 | 2014-07-09 |
| 2 | 4V7M|1|AW | Transfer RNA | tRNA-Gln, RNA (5'-R(*AP*AP*AP*AP*AP*GP*GP*AP*AP*AP*UP*A*AP*AP*AP*AP*UP*GP*CP*AP*GP*UP*UP*CP*AP*AP*UP*CP*UP*A)-3') | Escherichia coli | Bacteria | RF00005 | The structures of Capreomycin bound to the 70S ribosome. | X-ray diffraction | 3.45 | 2014-07-09 |
Release history
| Release | 6.0 |
|---|---|
| Date | 2017-04-04 |
Parents
| This class | Parent classes | Release id | Intersection | Added to this class | Only in parent |
|---|---|---|---|---|---|
| NR_4.0_32909.1 | NR_4.0_71982.1 | 6.0 | (2) 4V7M|1|AW, 4V7M|1|CW | (0) | (20) 1ZJW|1|B, 4V7L|1|CY, 1O0C|1|B, 2RE8|1|B, 1EXD|1|B, 1QRT|1|B, 1GTR|1|B, 4V7L|1|AW, 1QTQ|1|B, 1O0B|1|B, 1EUY|1|B, 4V7L|1|CW, 2RD2|1|B, 1QRS|1|B, 1GSG|1|T, 4JXX|1|B, 1QRU|1|B, 1GTS|1|B, 1EUQ|1|B, 4V7L|1|AY |
Children
| This class | Descendant classes | Release id | Intersection | Only in this class | Added to child |
|---|---|---|---|---|---|
| NR_4.0_32909.1 | NR_4.0_00769.1 | 7.0 | (2) 4V7M|1|AW, 4V7M|1|CW | (0) | (20) 2RE8|1|B, 1QRU|1|B, 2RD2|1|B, 1QRT|1|B, 1ZJW|1|B, 1QRS|1|B, 1QTQ|1|B, 1O0C|1|B, 1O0B|1|B, 1GTS|1|B, 1GTR|1|B, 1GSG|1|T, 4V7L|1|CY, 1EXD|1|B, 4V7L|1|CW, 1EUY|1|B, 4V7L|1|AY, 1EUQ|1|B, 4V7L|1|AW, 4JXX|1|B |
Heat map of mutual geometric discrepancy, in Angstroms per nucleotide. Instances are ordered to put similar structures near each other. The colorbar ranges from 0 to the maximum observed discrepancy, up to 0.5
#S - ordering by similarity (same as in the heat map).| #S | PDB | Title | Method | Resolution | Length | NAKB_NA_annotation | NAKB_protein_annotation |
|---|---|---|---|---|---|---|---|
| 1 | 4V7M|1|CW | Title: The structures of Capreomycin bound to the 70S ribosome. | X-RAY DIFFRACTION | 3.45 | 74 | ||
| 2 | 4V7M|1|AW | Title: The structures of Capreomycin bound to the 70S ribosome. | X-RAY DIFFRACTION | 3.45 | 74 |
Coloring options: